Moritz E. Beber

Results 453 comments of Moritz E. Beber

> > Any chance that you can add a redirect on the proxy that runs sbml.org? > > Thank you. How do I do that? I'm not adding weighted direction...

> I think another good helper function for cobrapy would be a reaction to prune linear chains of boundary reactions to a single reaction so ` A_b A_c A_e` becomes...

> Also I wanted to ask if there is a more direct way to contribute to your documentation? Any and all contributions to the documentation are very welcome! It depends...

Good idea. Additionally, we want to focus cobrapy development in the next sprint which hopefully means we can release cobrapy without the old solvers and thus end up with a...

I fully support the idea but don't really see us implementing it until a cobrapy 1.0 or so.

> I wrote an editor based on cobrapy that allows you to edit and check both the model and the experimental information. Have a look at it here: https://github.com/JuBra/GEMEditor @matthiaskoenig...

@HAHerrmann I've just released cobrapy 0.11.3 including @cdiener's latest changes. Please give it a try.

@cdiener you mentioned in the past that you might still need sampling at your new job. Is CHRR something you would still like to implement or should we put this...

Okay, then I'll keep this issue open. I was doing a bit of house cleaning :smiley:

I agree with adding compartments, however, it's quite hard as well. Groups have been added but are not fully supported. We miss (1) context management and (2) support for I/O...