deepRAM
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MedChaabane
End-to-end deep learning toolkit for predicting protein binding sites and motifs.
Thanks for the nice work. We are trying to make your work into an ML problem set for our class. I have a question about one-hot encoding code here https://github.com/MedChaabane/deepRAM/blob/87014f400d9bdeb96f04f7ae977071188deaebeb/deepRAM.py#L35...
Hi I am running the deepRAM as follows python deepRAM.py --train_data CLIP_train.gz --test_data CLIP_test.gz --data_type RNA --train True --evaluate_performance True --model_path DeepBind.pkl --out_file prediction.txt --Embedding False --Conv True --RNN False...
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End-to-end deep learning toolkit for predicting protein binding sites and motifs.