tractconverter
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MarcCote
Converter for different neuro-imaging file formats.
Collecting http://github.com/MarcCote/tractconverter/archive/master.zip Cache entry deserialization failed, entry ignored Downloading http://github.com/MarcCote/tractconverter/archive/master.zip / 81kB 206kB/s Complete output from command python setup.py egg_info: Downloading https://pypi.python.org/packages/source/d/distribute/distribute-0.6.14.tar.gz Extracting in C:\Users\201904~1\AppData\Local\Temp\tmpxvutj8tx Traceback (most recent call last):...
Simple answer would be the distribute file needs an update, or maybe just remove it as it is pretty standard to have that nowadays (I'll probably od that on my...
If you use something similar to ``` hdr = tc.formats.header.get_header_from_anat(ref_filename) out_tracts = tracts_format.create(output_filename, hdr) ``` where ref_filename is the name of the reference Nifti image, and you do NOT specify...
As discussed in email with MarcCote, there may be a bug in TRK constructor where the anat parameter is ignored. I also discussed with another contributor, jchoude, and he told...
When converting a VTK file that have been generated by the Fibernavigator, it is outputing some weird streamlines. The following VTK is the merging of several VTK files. It has...
When converting a file to the TRK format, we should write in the header more information (e.g. affine transform, voxel_order, world_space, ...).
Currently, in the VTK format, the **iter** function assumes that the points are ordered, so it only reads the number of points and the index of the start point of...
Right now, we can only read from an ascii VTK file. Actually, when loading an ascii VTK, we first convert it into a binary. The reason is, it was easier...
When loading or saving a VTK file, we should support the rest of the metadata (for example, color arrays).