Modification site bug for SageReader

[jalew188]

https://github.com/MannLabs/alphabase/blob/development/alphabase/psm_reader/sage_reader.py#L81

The modification site in alphabase (mod_sites) is 1<=site<=n, 0 is for N-term, and -1 for C-term.

Sage reader generates a wroing site (0<=site<=n-1).