BioSeq-GFN-AL

BioSeq-GFN-AL copied to clipboard

Questions on rollout procedure in run_amp.py

1

Hello, First thank you for this amazing work. I'm starting to work on rna sequence design and GFlowNet is definitely an interesting direction. I have question for the `RolloutWorker` in...

zmy1116

Hi @MJ10 I am very interested in your work and trying to reproduce the results, specifically for GFP (Table 3). Because some errors appeared when I ran `run_gfp.py` with the...

dlnp2

It seems not working for this script.

1

Traceback (most recent call last): File "/home/sunsun/xdzhang/BioSeq-GFN-AL-master/run_gfp.py", line 369, in main(args) File "/home/sunsun/xdzhang/BioSeq-GFN-AL-master/run_gfp.py", line 364, in main train(args, oracle, dataset) File "/home/sunsun/xdzhang/BioSeq-GFN-AL-master/run_gfp.py", line 340, in train proxy = construct_proxy(args, tokenizer,...

xdzhang-xdu

It dosen't work for run_amp.py

5

The error is as follows. /home/sunsun/xdzhang/BioSeq-GFN-AL-master/venv/bin/python /home/sunsun/xdzhang/BioSeq-GFN-AL-master/run_amp.py /usr/lib/python3/dist-packages/requests/__init__.py:89: RequestsDependencyWarning: urllib3 (1.26.9) or chardet (3.0.4) doesn't match a supported version! warnings.warn("urllib3 ({}) or chardet ({}) doesn't match a supported " Traceback...

xdzhang-xdu

running in Colab

2

Do you have any suggestion on how I can run it on colab? I am currently getting this error while running `run_amp.py` : ``` Traceback (most recent call last): File...

erfanhamdi

Not able to reproduce the diversity in the tf-bind8 task

4

Dear authors, I tried to reproduce the results using the code provided. However, I found the results different from the results you reported in the paper. Below is what I...

charlesxu90

erfanhamdi