Unexpected labels

Open maxguan1998 opened this issue 3 years ago • 1 comments

Unexpected labels found in file :/content/nnUNet/nnunet/nnUNet_raw_data_base/nnUNet_raw_data/Task001_pelvic/labelsTr/Spine_supine_001.nii.gz. Found these unexpected values (they should not be there) [-1024, -1023, -1022, -1021,.......]

Dear Dr, when I use the command <<!nnUNet_plan_and_preprocess -t 001 --verify_dataset_integrity>> the colab says, there are unexpected labels. I comfusing about this error and do not know the reasons. Thank you. Best regards

Apr 02 '22 11:04 maxguan1998

I means that there are values in your segmentation image that don't belong there! Your segmentation must be an integer image with 0=background, 1=class1, 2=class2 etc

Apr 08 '22 05:04 FabianIsensee

Hi @maxguan1998, have you solve that bug yet? Please help me. Thanks in advance!

Sep 04 '23 04:09 hdnminh