TractSeg
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MIC-DKFZ
TractSeg: command not found
I am using TractSeg via macOS. python version 3.8.9 pip3 version 22.0.4 pytorch was also successfully installed, please see:
lixue@pc244-171 examples % pip3 show torch
Name: torch
Version: 1.11.0
Summary: Tensors and Dynamic neural networks in Python with strong GPU acceleration
Home-page: https://pytorch.org/
Author: PyTorch Team
Author-email: [email protected]
License: BSD-3
Location: /Users/lixue/Library/Python/3.8/lib/python/site-packages
Requires: typing-extensions
Required-by: torchaudio, torchvision
lixue@pc244-171 examples %
I installed the TractSeg via pip3 install TractSeg, and I can see the TractSeg exists in the folder /Users/lixue/Library/Python/3.8/bin, but when I try to type TractSeg --help , it showed: command not found: TractSeg
I guess there may be some problems (maybe path?) when installing TractSeg, but I cannot handle this, could you give me some guidance with this issue? Thanks in advance. Li
Unfortunately it is more difficult to test TractSeg on MacOS. It is always tested on Ubuntu. You could try if you can directly install it from github:
pip install https://github.com/MIC-DKFZ/TractSeg/archive/master.zip
