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Missing "shapes.csv" in utils.create_meta_data_table function

Open parataaito opened this issue 2 years ago • 0 comments

Hi !

I was trying to go through the preprocessing-of-covid19-dataset.ipynb file and I got into an error when calling the following code:

df = create_meta_data_table(output_path)

# Filter CT scans with less than 20 slices 
df = df[df.z > 20]

plot_dicomexamined_distribution(df, 
                                others_percentage_upper_bound=0.015)

The error occurs in create_meta_data_table where a "shapes.csv" file is trying to be read. However, I did not find this file either in the repo or in the COVID-19-AR zip file.

Can someone help me find it?

parataaito avatar Nov 08 '23 09:11 parataaito