me-ica

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New version v3.3.0 with experimental features - outputs in T2* units - Removed mdp and nibabel - Adding code to add delta-T2* unit outputs - Added T2* and %dT2* scaled...

prantikk

- Upgrade to Python 3 - Remove mdp and nibabel - Support T2* unit outputs from lib_tedana.py Feature #288 Export TED maps in all formats Feature #291 Enhance logcomment feature...

pkunduCere

*+ WARNING: If you are performing spatial transformations on an oblique dset

2

I run multi-echo on 7T The scanner output was 800 dicoms for 4 TEs (9.5 24.71 39.92 55.13), I sorted them into 4 folders and use dcm2niigui ('compressed FSL (4D...

worgwis

Please note that this repository has been archived, as it is currently unmaintained. We are not accepting any new bug reports or feature requests at this time. Instead, we encourage...

emdupre

Issue with 3dwarpDrive with MEICA.py

7

Hi, I got the following error ++ 3dWarpDrive: AFNI version=AFNI_17.2.05 (Jul 27 2017) [64-bit] ++ Authored by: RW Cox cp: cannot stat âS13015_T1w_MPR_BIC_v1_7_do_at.niiâ: No such file or directory S13015_T1w_MPR_BIC_v1_7_do_at.nii.gz file...

sameera2004

Unable to install with python 3 pip

1

Here is a copy of the error code: ``` (base) aaron@aaron-VirtualBox:/media/sf_Ubuntu_files$ pip3 install meica Collecting meica Exception: Traceback (most recent call last): File "/usr/lib/python3/dist-packages/pip/basecommand.py", line 215, in main status =...

Aaronearlerichardson

nibabel problem

2

Hello I'm running meica on a Windows 10 machine, with a bash shell under Windows Subsystem for Linux, with command `meica.py -d MJF_180_ME_1.nii,MJF_180_ME_2.nii,MJF_180_ME_3.nii -e 14.8,37.98,61.16 --tpattern=seq-z --prefix MJF_180_multiecho` I get...

michaelf500

Hi, I am supporting the preprocessing of multi-echo fMRI data here at Mount Sinai (used to work with Prantik here :-)) We have preprocessed quite a lot of data using...

kuanghan

non linear registration in meica.py

2

Hi, I am trying to set up a meica preprocessing. Everything runs smoothly when I am including linear registration (to anatomical and standard). However, the I try to add --qwarp...

maryeveh

me-ica v3.2.2

1

Hi, The current github repository does not reflect the last commit for v3.2 on the bitbucket (commit bc839f7 with switch to version 3.2.2) which included the change in default kdaw...

gtsaber