spyglass
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LorenFrankLab
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
At a recent meeting, we discussed existing work that looks at artifacts across (rather than within) sort groups @michaelcoulter - Can you point us to this work?
**Describe the bug** When deleting a _subset_ from `SpikeSortingSelection` in the v1 pipeline, the delete step attempts to delete _all_ entries from `SpikeSortingOutput.CurationV1`. Suspect it's a failure to join and...
**Is your feature request related to a problem? Please describe.** Tutorial [notebook 04](https://github.com/LorenFrankLab/spyglass/blob/master/notebooks/04_PopulateConfigFile.ipynb) describes use of a config file to include additional fields during spyglass import not in the nwb...
Working on helper functions for finding spikesorting merge ids based on a restriction and ran into a few questions: - The v1 spikesorting pipeline no longer enforces that users run...
The Spyglass database and code are intricately linked. The tables defined in Python within Spyglass are intended to have a perfect correspondence with the tables in the MySQL database. If...
Typically analyses require specific parameters, and our default is to have a manually entered schema with the parameters for a given analysis and then an autopopulated table with the analysis....
**Is your feature request related to a problem? Please describe.** The set_snippet_len method exists but is not being utilized in the current pipeline. This makes it unclear what the window...
**Is your feature request related to a problem? Please describe.** When detecting negative going spikes, the peak offset metric works well for detecting other large negative deflections on the peak...
**Is your feature request related to a problem? Please describe.** There are some units that have very large standard deviations in their waveforms (grey background), but aren't detected by any...
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Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF