HMMRATAC
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Training bed not outputted when blacklist list included
I found that when blacklist was included with -e blacklist, there was no Name_training.bed in the output, while when blacklist was not included, Name_traning.bed was generated in the output. Are there any speical purposes for this ?
Originally posted by @wangjiawen2013 in https://github.com/LiuLabUB/HMMRATAC/issues/22#issuecomment-526815169
I've tried this on the 20to30MB
file and don't seem to find a problem. I know this issue was created a long time ago but maybe you still have an idea when it was triggered?
(I'm using an blacklist file containing only chr22 0 100
).