celldex

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Cant install celldex because dependency alabaster cant be installed...

1

Hi! I updated R a few days ago and I also updated BiocManager and so... but when trying to install celldex, it's not working... I've tried reinstalling Rcpp, rhd5lib, hdf5,...

marencc

Cannot load dataset

1

Hi, I am encountering this issue when running "celldex::HumanPrimaryCellAtlasData()" locally. Error: SignatureDoesNotMatch (HTTP 403). The request signature we calculated does not match the signature you provided. Check your secret access...

changxuling

Cannot Run BlueprintEncodeData()

5

I am trying to run the following line of code after installing celldex. `ref Error in `collect()`: ! Failed to collect lazy table. Caused by error in `db_collect()`: ! Arguments...

taraeicher

Can't install celldex - can't find boost library even though it's loaded

1

Hello, I'm having trouble installing celldex on R 4.0.3 with BioC v 3.12. When I enter `BiocManager::install("celldex")`, I get the following error: ``` In file included from vendor/boost/preprocessor/control/while.hpp(323), from vendor/boost/preprocessor/arithmetic/add.hpp(60),...

Dzhan4

Warning: call dbDisconnect() when finished working with a connection

2

this warning comes out in a situation that is specific to my application and is too complicated to describe and reproduce here. However, the warning also appears when the following...

dariomel

Obtaining normalized count sTPMs

1

Dear Authors, Thank you for reading my issue I am trying to obtain the TPM count from the Blueprint Encode Data set I used `assay()` to get the log transfomed...

moutazhelal

CellMarker

1

Hi, Could you add human and mouse cell markers from Cellmarker (http://biocc.hrbmu.edu.cn/CellMarker/download.jsp) as references ?

akhst7

Can't run mouse_imm_ref command, SSL issue

1

Hi, I'm an IT rep for our company and one of our researchers is trying to do the following, but is unable to: ``` > library(celldex) > mouse_imm_ref

comrade1809

ImmGenData: discrepancies in cell ontology mapping?

1

Hi, Thanks for the great package! The idea of using label.ont is great, however I'm wondering how was the mapping to the Cell Ontology (label.ont) done in the ImmGenData (or...

prepiscak