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Improper concept index in MMI output
For the input file: 00000086.txt
In MetaMap, the outputs used to come like these:
'00000086-0'|MMI|17.80|Mediastinum|C0025066|[blor]|["MEDIASTINUM"-tx-2-"mediastinum"-noun-0]|TX|50/11|A01.923.761.800.500 '00000086-73'|MMI|8.34|Lung|C0024109|[bpoc]|["LUNGS"-tx-1-"lungs"-noun-0]|TX|1/5|A04.411
But the output in MetaMapLite comes like these: 00000000.tx|MMI|2.37|Mediastinum|C0025066|[blor]|"Mediastinum"-text-0-"mediastinum"-NN-0|63/11|A01.923.761.800.500 00000000.tx|MMI|0.98|Lung|C0024109|[bpoc]|"Lungs"-text-0-"lungs"-NNS-0|103/5|A04.411
The first field in MetaMap output represents filename and the char start pos of the sentence. But in MetaMapLite that information is missing. This makes programs using that information fail.
I had tested using the release: MetaMapLite 3.6.1p1