ITKUltrasound issues

ITKUltrasound notebook checks possibly running against previous versions

3

In #176 notebook CI checks seem to fail with the bug that is present in the released `0.5.1` package which the PR aims to fix and tag `0.5.2`. My guess...

tbirdso

Improve test coverage with practical data sets

4

Several ultrasound image filters rely on contrived data for CTest coverage. For example, `Spectra1DAveragingImageFilter` tests currently average over multiple copies of a single image, `spectra_pixel_image.mha`, which depicts a 3D image...

tbirdso

Add Test Dependency on ITKVkFFTBackend

9

`ITKUltrasound` will depend on `ITKVkFFTBackend` for accelerated FFT computation. `ITKVkFFTBackend` defines factory overrides for accelerated implementations of ITK FFT interface classes and should not be considered a direct dependency for...

tbirdso

adding ge kretz 2d data access

1

Hi 👋 We've been using the 2d image classes in itkultrasound to resample polar 2d data from a ge voluson system. Keen to share and add this IO functionality. It...

gordon-n-stevenson

WIP: ENH: Add BlockMatching registration Python wrappings + example

4

Adding wrappings and Python example to port [block matching multi-resolution registration test](https://github.com/KitwareMedical/ITKUltrasound/blob/master/test/itkBlockMatchingMultiResolutionImageRegistrationMethodTest.cxx) from cxx. Wrappings will allow us to more rapidly iterate over registration parameter adjustments and take advantage of...

tbirdso

Extend SRAD image filter for ND

`itk::SpeckleReducingAnisotropicDiffusionImageFilter` is currently implemented to compute gradients/divergence in a 2D local neighborhood regardless of the dimension of the input image. The filter can be extended to estimate diffusion in ND...

tbirdso

WIP: Add OSRAD Python development notebook

1

@vicory Could you please review the OSRAD procedure in its current Python implementation? I've added a draft notebook here with initial filtering results on phantom data.

tbirdso

Incorporate speckle reduction algorithms?

7

Hi, I just discovered ITKUltrasound. As you guys probably know, reducing speckle can have a significant impact on image segmentation. Have you thought about incorporating a suite of different algorithms...

csheaff