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Heatmap normalise_by only works by sample names

Open bernt-matthias opened this issue 5 months ago • 4 comments

According to the docs I can

A variable or a specific sample in the metadata to normalise the counts by.

If I do

amp_heatmap(AalborgWWTPs, normalise=T, normalise_by = 'Plant')

I get: Error: Plant is not found among group names, cannot normalise

I debugged this a bit, and it seems that normalisation is only possible by a sample at the moment.

Note, For me it would be fine to fix the docs.

bernt-matthias avatar Jan 23 '24 10:01 bernt-matthias