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genebass data source

Open cariaso opened this issue 4 years ago • 1 comments

https://genebass.org/ seems like a worthy annotation source with a permissive license https://genebass.org/terms and bulk download available from https://genebass.org/downloads

example results https://genebass.org/gene/ENSG00000130203?burdenSet=pLoF&phewasOpts=1&resultLayout=full

cariaso avatar Jul 13 '21 18:07 cariaso

Thanks. We'll take a look.

rkimoakbioinformatics avatar Jul 15 '21 15:07 rkimoakbioinformatics

Currently this database is too large to include in OpenCRAVAT. We are working on ways to either better compress annotator data, or support fast querying of external resources. Genebass does seem like an excellent data source.

kmoad avatar Mar 09 '23 20:03 kmoad