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Published 20 hours ago • verified publisher icon KamilSJaron

Bad examples of smudgeplot

Open KamilSJaron opened this issue 6 years ago • 5 comments

A collection of smudgeplots that went wrong... (a material for a wiki page showing potential pitfalls)

Types of problems:

  • a problem of input data
  • a problem of input parameters
  • a problem of smudge annotation

KamilSJaron avatar May 15 '19 06:05 KamilSJaron

(problem with data) 2 species, one octoploid, one diploid were mixed together (I accidentally pulled a wrong library from ncbi)

strawberry_smudgeplot

KamilSJaron avatar May 15 '19 06:05 KamilSJaron

Ps791_smudgeplot_v0 2 1dev2_smudgeplot_log10

KamilSJaron avatar Jul 21 '20 10:07 KamilSJaron

There are so many bad examples here: https://github.com/KamilSJaron/smudgeplot/issues/58#issuecomment-661774838

KamilSJaron avatar Aug 23 '23 08:08 KamilSJaron