Kai Li

Thanks for the advice! This is actually on my todo list. I will add this new feature in the next version.

Sorry about that. Could you share your files with me? I can take a look later.

Hi, Hope everything works well. In your issue, you used a tsv+mzXML combination, right? Or a tsv+mzML combination? PDV actually can't support the tsv+mzXML combination. If it's the latter one,...

Hi Manuel, I think it's not because memory. The reason might be the sl4j library. I have updated it and will release a new version soon, maybe tomorrow. Please let...

Sorry for the late update. I will release it as soon as this weekend.

Hi there, could you please share your data with me? I just want to make sure the new version will solve your problem.

Hi, PDV cannot handle o-linked enriched glyco-proteomics data results from MSFragger right now since we cannot get localization information from it. But we are working closely with the MSFragger team...

Hi Yuka, Did you change or move your result folder and raw files after searching? Can you share your FragPipe log file and screenshot of your result folder? Best, Kai