SCMarker
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Error in installation
Dear Sir, Can you please fix the issue I encountered in installing your package? Cheers Calogero ########### I tried installing your package: library(devtools) Loading required package: usethis
install_github("KChen-lab/SCMarker") Downloading GitHub repo KChen-lab/SCMarker@master ✔ checking for file ‘/private/var/folders/_b/4rmqysy94j91kb8xjyc551z40000gn/T/Rtmpgv8C6V/remotes15f6348ff42e/KChen-lab-SCMarker-c07d842/DESCRIPTION’ ... ─ preparing ‘SCMarker’: ✔ checking DESCRIPTION meta-information ... Warning: /private/var/folders/_b/4rmqysy94j91kb8xjyc551z40000gn/T/RtmpeP6Kqc/Rbuild17d32bd5251d/SCMarker/man/HeatmapCluster.Rd:86: unexpected END_OF_INPUT '} ' ─ installing the package to process help pages ─ saving partial Rd database (1.3s) ─ checking for LF line-endings in source and make files and shell scripts ─ checking for empty or unneeded directories ─ looking to see if a ‘data/datalist’ file should be added ─ building ‘SCMarker_2.0.tar.gz’
- installing source package ‘SCMarker’ ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help Error : (converted from warning) /private/var/folders/_b/4rmqysy94j91kb8xjyc551z40000gn/T/RtmpSdymSM/R.INSTALL17fe3db0335f/SCMarker/man/HeatmapCluster.Rd:86: unexpected END_OF_INPUT '} ' ERROR: installing Rd objects failed for package ‘SCMarker’
- removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/SCMarker’ Error: Failed to install 'SCMarker' from GitHub: (converted from warning) installation of package ‘/var/folders/_b/4rmqysy94j91kb8xjyc551z40000gn/T//Rtmpgv8C6V/file15f656e812f7/SCMarker_2.0.tar.gz’ had non-zero exit status
I cloned the repository and I did a build test and I got the following issues:
warning 1
✔ checking DESCRIPTION meta-information ... Warning: /private/var/folders/_b/4rmqysy94j91kb8xjyc551z40000gn/T/RtmpOtbfSW/Rbuild16401f1c0c3c/SCMarker/man/HeatmapCluster.Rd:86: unexpected END_OF_INPUT '}
error 1: checking for unstated dependencies in examples ... WARNING Warning: parse error in file 'SCMarker-Ex.R': 156:5: unexpected symbol 155: topmarker=as.data.frame(feature 156: topmarker ^