Wrong libpython configuration after changing python dir on Linux
I want to make a portable app with PyCall included, so I move conda into a common folder (this folder I would later copy to another machine when deploying compiled app binaries):
sudo cp -rf ~/.julia/conda /opt/conda
Then I rebuild PyCall and make sure all conda and python-related paths (there are much of them!) point to the right place:
julia -e 'import Pkg;
ENV["CONDA_JL_HOME"] = "/opt/conda/3";
ENV["PYTHON"] = "/opt/conda/3/bin/python3.9";
Pkg.add("PyCall");
Pkg.build("PyCall");
using PyCall
@info(
"Conda.jl and PyCall.jl configuration after build, BUT wrong libpython!",
PyCall.Conda.ROOTENV,
PyCall.Conda.MINICONDA_VERSION,
PyCall.Conda.deps_file,
PyCall.Conda.PREFIX,
PyCall.Conda.BINDIR,
PyCall.Conda.LIBDIR,
PyCall.Conda.SCRIPTDIR,
PyCall.Conda.PYTHONDIR,
PyCall.Conda.conda,
PyCall.Conda.CONDARC,
PyCall.PYTHONHOME,
PyCall.libpython
)
'
Which gives me all paths set right but PyCall.libpython, which prevents me from running my compiled app on another machine: (also, I'm not sure about colons in PyCall.PYTHONHOME)
┌ Info: Conda.jl and PyCall.jl configuration after build, BUT wrong libpython!
│ PyCall.Conda.ROOTENV = "/opt/conda/3"
│ PyCall.Conda.MINICONDA_VERSION = "3"
│ PyCall.Conda.deps_file = "/home/root2/.julia/packages/Conda/x2UxR/src/../deps/deps.jl"
│ PyCall.Conda.PREFIX = "/opt/conda/3"
│ PyCall.Conda.BINDIR = "/opt/conda/3/bin"
│ PyCall.Conda.LIBDIR = "/opt/conda/3/lib"
│ PyCall.Conda.SCRIPTDIR = "/opt/conda/3/bin"
│ PyCall.Conda.PYTHONDIR = "/opt/conda/3/bin"
│ PyCall.Conda.conda = "/opt/conda/3/bin/conda"
│ PyCall.Conda.CONDARC = "/opt/conda/3/condarc-julia.yml"
│ PyCall.PYTHONHOME = "/opt/conda/3:/opt/conda/3"
└ PyCall.libpython = "/home/root2/.julia/conda/3/lib/libpython3.9.so.1.0"
Contents of deps.jl:
$ cat /home/root2/.julia/packages/Conda/x2UxR/src/../deps/deps.jl
const ROOTENV = "/opt/conda/3"
const MINICONDA_VERSION = "3"
const USE_MINIFORGE = true
const CONDA_EXE = "/opt/conda/3/bin/conda"
Additional thoughts about the issue The error occurred during running the compiled app on the another machine and links to the line :
libpy_handle = libpython === nothing ? C_NULL :
Libdl.dlopen(libpython, Libdl.RTLD_LAZY|Libdl.RTLD_DEEPBIND|Libdl.RTLD_GLOBAL)
Also it seems that PyCall.libpython value defines here:
append_truthy(lib_dirs, sysconfig.get_config_var('LIBPL'))
append_truthy(lib_dirs, sysconfig.get_config_var('srcdir'))
append_truthy(lib_dirs, sysconfig.get_config_var("LIBDIR"))
But I have no idea how to change it to the correct path.
PS. On Windows OS everything works correctly using the same approach.