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Installing PyCall in Julia 1.2 fails on Mac OS X

Open Kameshkk opened this issue 6 years ago • 3 comments

I tried installing PyCall on a fresh install of Julia 1.2 but got an error stating setuptools can't be removed. Any idea what might be going on:

julia> Pkg.add("PyCall")
   Cloning default registries into `~/.julia`
   Cloning registry from "https://github.com/JuliaRegistries/General.git"
     Added registry `General` to `~/.julia/registries/General`
 Resolving package versions...
 Installed VersionParsing ───── v1.1.3
 Installed Tokenize ─────────── v0.5.6
 Installed Parsers ──────────── v0.3.7
 Installed Compat ───────────── v2.2.0
 Installed OrderedCollections ─ v1.1.0
 Installed DataStructures ───── v0.17.2
 Installed MacroTools ───────── v0.5.1
 Installed PyCall ───────────── v1.91.2
 Installed Conda ────────────── v1.3.0
 Installed CSTParser ────────── v0.6.2
 Installed JSON ─────────────── v0.21.0
  Updating `~/.julia/environments/v1.2/Project.toml`
  [438e738f] + PyCall v1.91.2
  Updating `~/.julia/environments/v1.2/Manifest.toml`
  [00ebfdb7] + CSTParser v0.6.2
  [34da2185] + Compat v2.2.0
  [8f4d0f93] + Conda v1.3.0
  [864edb3b] + DataStructures v0.17.2
  [682c06a0] + JSON v0.21.0
  [1914dd2f] + MacroTools v0.5.1
  [bac558e1] + OrderedCollections v1.1.0
  [69de0a69] + Parsers v0.3.7
  [438e738f] + PyCall v1.91.2
  [0796e94c] + Tokenize v0.5.6
  [81def892] + VersionParsing v1.1.3
  [2a0f44e3] + Base64 
  [ade2ca70] + Dates 
  [8bb1440f] + DelimitedFiles 
  [8ba89e20] + Distributed 
  [b77e0a4c] + InteractiveUtils 
  [76f85450] + LibGit2 
  [8f399da3] + Libdl 
  [37e2e46d] + LinearAlgebra 
  [56ddb016] + Logging 
  [d6f4376e] + Markdown 
  [a63ad114] + Mmap 
  [44cfe95a] + Pkg 
  [de0858da] + Printf 
  [3fa0cd96] + REPL 
  [9a3f8284] + Random 
  [ea8e919c] + SHA 
  [9e88b42a] + Serialization 
  [1a1011a3] + SharedArrays 
  [6462fe0b] + Sockets 
  [2f01184e] + SparseArrays 
  [10745b16] + Statistics 
  [8dfed614] + Test 
  [cf7118a7] + UUIDs 
  [4ec0a83e] + Unicode 
  Building Conda ─→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
  Building PyCall → `~/.julia/packages/PyCall/ttONZ/deps/build.log`
┌ Error: Error building `PyCall`, showing the last 100 of log: 
│ Collecting package metadata (current_repodata.json): ...working... done
│ Solving environment: ...working... done
│ 
│ ## Package Plan ##
│ 
│   environment location: /Users/kamesh/.julia/conda/3
│ 
│   added / updated specs:
│     - conda
│ 
│ 
│ The following packages will be downloaded:
│ 
│     package                    |            build
│     ---------------------------|-----------------
│     asn1crypto-1.0.1           |           py37_0         161 KB
│     ca-certificates-2019.8.28  |                0         133 KB
│     certifi-2019.9.11          |           py37_0         154 KB
│     chardet-3.0.4              |        py37_1003         174 KB
│     conda-4.7.12               |           py37_0         3.0 MB
│     conda-package-handling-1.6.0|   py37h1de35cc_0         1.3 MB
│     openssl-1.1.1d             |       h1de35cc_2         2.2 MB
│     pysocks-1.7.1              |           py37_0          30 KB
│     sqlite-3.30.0              |       ha441bb4_0         2.4 MB
│     tqdm-4.36.1                |             py_0          50 KB
│     ------------------------------------------------------------
│                                            Total:         9.6 MB
│ 
│ The following packages will be REMOVED:
│ 
│   bzip2-1.0.8-h1de35cc_0
│   libarchive-3.3.3-h786848e_5
│   libiconv-1.15-hdd342a3_7
│   libxml2-2.9.9-hf6e021a_1
│   lz4-c-1.8.1.2-h1de35cc_0
│   lzo-2.10-h362108e_2
│   pip-19.1.1-py37_0
│   python-libarchive-c-2.8-py37_11
│   python.app-2-py37_9
│   setuptools-41.0.1-py37_0
│   wheel-0.33.4-py37_0
│   zstd-1.3.7-h5bba6e5_0
│ 
│ The following packages will be UPDATED:
│ 
│   asn1crypto                                  0.24.0-py37_0 --> 1.0.1-py37_0
│   ca-certificates                               2019.5.15-0 --> 2019.8.28-0
│   certifi                                  2019.6.16-py37_0 --> 2019.9.11-py37_0
│   chardet                                      3.0.4-py37_1 --> 3.0.4-py37_1003
│   conda                                       4.7.10-py37_0 --> 4.7.12-py37_0
│   conda-package-han~                          1.3.11-py37_0 --> 1.6.0-py37h1de35cc_0
│   openssl                                 1.1.1c-h1de35cc_1 --> 1.1.1d-h1de35cc_2
│   pysocks                                      1.7.0-py37_0 --> 1.7.1-py37_0
│   sqlite                                  3.29.0-ha441bb4_0 --> 3.30.0-ha441bb4_0
│   tqdm                                          4.32.1-py_0 --> 4.36.1-py_0
│ 
│ 
│ 
│ Downloading and Extracting Packages
certifi-2019.9.11    | 154 KB    | ########## | 100% 
tqdm-4.36.1          | 50 KB     | ########## | 100% 
conda-package-handli | 1.3 MB    | ########## | 100% 
asn1crypto-1.0.1     | 161 KB    | ########## | 100% 
chardet-3.0.4        | 174 KB    | ########## | 100% 
ca-certificates-2019 | 133 KB    | ########## | 100% 
openssl-1.1.1d       | 2.2 MB    | ########## | 100% 
conda-4.7.12         | 3.0 MB    | ########## | 100% 
sqlite-3.30.0        | 2.4 MB    | ########## | 100% 
pysocks-1.7.1        | 30 KB     | ########## | 100% 
│ Preparing transaction: ...working... done
│ Verifying transaction: ...working... failed
│ 
│ RemoveError: 'setuptools' is a dependency of conda and cannot be removed from
│ conda's operating environment.
│ 
│ ┌ Info: Using the Python distribution in the Conda package by default.
│ └ To use a different Python version, set ENV["PYTHON"]="pythoncommand" and re-run Pkg.build("PyCall").
│ [ Info: Downloading miniconda installer ...
│ [ Info: Installing miniconda ...
│ [ Info: Running `conda config --add channels defaults --file /Users/kamesh/.julia/conda/3/condarc-julia.yml --force` in root environment
│ [ Info: Running `conda update -y conda` in root environment
│ ERROR: LoadError: failed process: Process(setenv(`/Users/kamesh/.julia/conda/3/bin/conda update -y conda`,["CLICOLOR=1", "LSCOLORS=CxFxGxDxbxegedabagGxGx", "PATH=/Applications/Julia-1.2.app/Contents/Resources/julia/bin/:/anaconda3/bin:/anaconda3/condabin:/anaconda3/bin:/opt/local/bin:/opt/local/sbin:/Developer/NVIDIA/CUDA-9.2/bin:/Library/TeX/texbin:/Applications/MATLAB_R2014a.app/bin:/Applications/MATLAB_R2011b.app/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/opt/X11/bin:/Library/TeX/Distributions/.DefaultTeX/Contents/Programs/texbin", "PWD=/Users/kamesh", "XPC_FLAGS=0x0", "_CE_M=", "XPC_SERVICE_NAME=0", "TERM_PROGRAM=Apple_Terminal", "DISPLAY=/private/tmp/com.apple.launchd.H5wPiV35rm/org.macosforge.xquartz:0", "SHELL=/bin/bash"  …  "Apple_PubSub_Socket_Render=/private/tmp/com.apple.launchd.btcQWzUiSj/Render", "_CE_CONDA=", "USER=kamesh", "TERM=xterm", "MKL_NUM_THREADS=8", "TERM_PROGRAM_VERSION=421.1", "JULIA_NUM_THREADS=8", "HOME=/Users/kamesh", "OPENBLAS_MAIN_FREE=1", "PYTHONIOENCODING=UTF-8"]), ProcessExited(1)) [1]
│ 
│ Stacktrace:
│  [1] pipeline_error at ./process.jl:813 [inlined]
│  [2] #run#536(::Bool, ::typeof(run), ::Cmd) at ./process.jl:728
│  [3] run at ./process.jl:726 [inlined]
│  [4] runconda(::Cmd, ::String) at /Users/kamesh/.julia/packages/Conda/kLXeC/src/Conda.jl:113
│  [5] runconda(::Cmd) at /Users/kamesh/.julia/packages/Conda/kLXeC/src/Conda.jl:111
│  [6] _install_conda(::String, ::Bool) at /Users/kamesh/.julia/packages/Conda/kLXeC/src/Conda.jl:172
│  [7] _install_conda(::String) at /Users/kamesh/.julia/packages/Conda/kLXeC/src/Conda.jl:152
│  [8] runconda(::Cmd, ::String) at /Users/kamesh/.julia/packages/Conda/kLXeC/src/Conda.jl:111
│  [9] #add#1(::String, ::typeof(Conda.add), ::String, ::String) at /Users/kamesh/.julia/packages/Conda/kLXeC/src/Conda.jl:184
│  [10] add at /Users/kamesh/.julia/packages/Conda/kLXeC/src/Conda.jl:183 [inlined] (repeats 2 times)
│  [11] top-level scope at /Users/kamesh/.julia/packages/PyCall/ttONZ/deps/build.jl:84
│  [12] include at ./boot.jl:328 [inlined]
│  [13] include_relative(::Module, ::String) at ./loading.jl:1094
│  [14] include(::Module, ::String) at ./Base.jl:31
│  [15] include(::String) at ./client.jl:431
│  [16] top-level scope at none:5
│ in expression starting at /Users/kamesh/.julia/packages/PyCall/ttONZ/deps/build.jl:43
│ 
│ Full log at /Users/kamesh/.julia/packages/PyCall/ttONZ/deps/build.log
└ @ Pkg.Operations /Users/sabae/buildbot/worker/package_macos64/build/usr/share/julia/stdlib/v1.2/Pkg/src/backwards_compatible_isolation.jl:647


Kameshkk avatar Oct 15 '19 19:10 Kameshkk

Our package's Travis builds for Julia 1.1 through 1.3 are failing due to similar PyCall installation errors:

Building PyCall ─→ `~/.julia/packages/PyCall/ttONZ/deps/build.log`
392┌ Error: Error building `PyCall`: 
393│   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
394│                                  Dload  Upload   Total   Spent    Left  Speed
395100 52.0M  100 52.0M    0     0  25.5M      0  0:00:02  0:00:02 --:--:-- 25.6M
396│ PREFIX=/Users/travis/.julia/conda/3
397│ Unpacking payload ...
398Collecting package metadata (current_repodata.json): ...working... done
399│ Solving environment: ...working... done
400│ 
401│ ## Package Plan ##
402│ 
403│   environment location: /Users/travis/.julia/conda/3
404│ 
405│   added / updated specs:
406│     - asn1crypto==0.24.0=py37_0
407│     - bzip2==1.0.8=h1de35cc_0
408│     - ca-certificates==2019.5.15=0
409│     - certifi==2019.6.16=py37_0
410│     - cffi==1.12.3=py37hb5b8e2f_0
411│     - chardet==3.0.4=py37_1
412│     - conda-package-handling==1.3.11=py37_0
413│     - conda==4.7.10=py37_0
414│     - cryptography==2.7=py37ha12b0ac_0
415│     - idna==2.8=py37_0
416│     - libarchive==3.3.3=h786848e_5
417│     - libcxx==4.0.1=hcfea43d_1
418│     - libcxxabi==4.0.1=hcfea43d_1
419│     - libedit==3.1.20181209=hb402a30_0
420│     - libffi==3.2.1=h475c297_4
421│     - libiconv==1.15=hdd342a3_7
422│     - libxml2==2.9.9=hf6e021a_1
423│     - lz4-c==1.8.1.2=h1de35cc_0
424│     - lzo==2.10=h362108e_2
425│     - ncurses==6.1=h0a44026_1
426│     - openssl==1.1.1c=h1de35cc_1
427│     - pip==19.1.1=py37_0
428│     - pycosat==0.6.3=py37h1de35cc_0
429│     - pycparser==2.19=py37_0
430│     - pyopenssl==19.0.0=py37_0
431│     - pysocks==1.7.0=py37_0
432│     - python-libarchive-c==2.8=py37_11
433│     - python.app==2=py37_9
434│     - python==3.7.3=h359304d_0
435│     - readline==7.0=h1de35cc_5
436│     - requests==2.22.0=py37_0
437│     - ruamel_yaml==0.15.46=py37h1de35cc_0
438│     - setuptools==41.0.1=py37_0
439│     - six==1.12.0=py37_0
440│     - sqlite==3.29.0=ha441bb4_0
441│     - tk==8.6.8=ha441bb4_0
442│     - tqdm==4.32.1=py_0
443│     - urllib3==1.24.2=py37_0
444│     - wheel==0.33.4=py37_0
445│     - xz==5.2.4=h1de35cc_4
446│     - yaml==0.1.7=hc338f04_2
447│     - zlib==1.2.11=h1de35cc_3
448│     - zstd==1.3.7=h5bba6e5_0
449│ 
450│ 
451│ The following NEW packages will be INSTALLED:
452│ 
453│   asn1crypto         pkgs/main/osx-64::asn1crypto-0.24.0-py37_0
454│   bzip2              pkgs/main/osx-64::bzip2-1.0.8-h1de35cc_0
455│   ca-certificates    pkgs/main/osx-64::ca-certificates-2019.5.15-0
456│   certifi            pkgs/main/osx-64::certifi-2019.6.16-py37_0
457│   cffi               pkgs/main/osx-64::cffi-1.12.3-py37hb5b8e2f_0
458│   chardet            pkgs/main/osx-64::chardet-3.0.4-py37_1
459│   conda              pkgs/main/osx-64::conda-4.7.10-py37_0
460│   conda-package-han~ pkgs/main/osx-64::conda-package-handling-1.3.11-py37_0
461│   cryptography       pkgs/main/osx-64::cryptography-2.7-py37ha12b0ac_0
462│   idna               pkgs/main/osx-64::idna-2.8-py37_0
463│   libarchive         pkgs/main/osx-64::libarchive-3.3.3-h786848e_5
464│   libcxx             pkgs/main/osx-64::libcxx-4.0.1-hcfea43d_1
465│   libcxxabi          pkgs/main/osx-64::libcxxabi-4.0.1-hcfea43d_1
466│   libedit            pkgs/main/osx-64::libedit-3.1.20181209-hb402a30_0
467│   libffi             pkgs/main/osx-64::libffi-3.2.1-h475c297_4
468│   libiconv           pkgs/main/osx-64::libiconv-1.15-hdd342a3_7
469│   libxml2            pkgs/main/osx-64::libxml2-2.9.9-hf6e021a_1
470│   lz4-c              pkgs/main/osx-64::lz4-c-1.8.1.2-h1de35cc_0
471│   lzo                pkgs/main/osx-64::lzo-2.10-h362108e_2
472│   ncurses            pkgs/main/osx-64::ncurses-6.1-h0a44026_1
473│   openssl            pkgs/main/osx-64::openssl-1.1.1c-h1de35cc_1
474│   pip                pkgs/main/osx-64::pip-19.1.1-py37_0
475│   pycosat            pkgs/main/osx-64::pycosat-0.6.3-py37h1de35cc_0
476│   pycparser          pkgs/main/osx-64::pycparser-2.19-py37_0
477│   pyopenssl          pkgs/main/osx-64::pyopenssl-19.0.0-py37_0
478│   pysocks            pkgs/main/osx-64::pysocks-1.7.0-py37_0
479│   python             pkgs/main/osx-64::python-3.7.3-h359304d_0
480│   python-libarchive~ pkgs/main/osx-64::python-libarchive-c-2.8-py37_11
481│   python.app         pkgs/main/osx-64::python.app-2-py37_9
482│   readline           pkgs/main/osx-64::readline-7.0-h1de35cc_5
483│   requests           pkgs/main/osx-64::requests-2.22.0-py37_0
484│   ruamel_yaml        pkgs/main/osx-64::ruamel_yaml-0.15.46-py37h1de35cc_0
485│   setuptools         pkgs/main/osx-64::setuptools-41.0.1-py37_0
486│   six                pkgs/main/osx-64::six-1.12.0-py37_0
487│   sqlite             pkgs/main/osx-64::sqlite-3.29.0-ha441bb4_0
488│   tk                 pkgs/main/osx-64::tk-8.6.8-ha441bb4_0
489│   tqdm               pkgs/main/noarch::tqdm-4.32.1-py_0
490│   urllib3            pkgs/main/osx-64::urllib3-1.24.2-py37_0
491│   wheel              pkgs/main/osx-64::wheel-0.33.4-py37_0
492│   xz                 pkgs/main/osx-64::xz-5.2.4-h1de35cc_4
493│   yaml               pkgs/main/osx-64::yaml-0.1.7-hc338f04_2
494│   zlib               pkgs/main/osx-64::zlib-1.2.11-h1de35cc_3
495│   zstd               pkgs/main/osx-64::zstd-1.3.7-h5bba6e5_0
496│ 
497│ 
498│ Preparing transaction: ...working... done
499│ Executing transaction: ...working... WARNING conda.core.envs_manager:register_env(46): Unable to register environment. Path not writable or missing.
500│   environment location: /Users/travis/.julia/conda/3
501│   registry file: /Users/travis/.conda/environments.txt
502│ done
503│ installation finished.
504│ Warning: 'defaults' already in 'channels' list, moving to the top
505│ Collecting package metadata (current_repodata.json): ...working... done
506│ Solving environment: ...working... done
507│ 
508│ ## Package Plan ##
509│ 
510│   environment location: /Users/travis/.julia/conda/3
511│ 
512│   added / updated specs:
513│     - conda
514│ 
515│ 
516│ The following packages will be downloaded:
517│ 
518│     package                    |            build
519│     ---------------------------|-----------------
520│     asn1crypto-1.0.1           |           py37_0         161 KB
521│     ca-certificates-2019.8.28  |                0         133 KB
522│     certifi-2019.9.11          |           py37_0         154 KB
523│     chardet-3.0.4              |        py37_1003         174 KB
524│     conda-4.7.12               |           py37_0         3.0 MB
525│     conda-package-handling-1.6.0|   py37h1de35cc_0         1.3 MB
526│     openssl-1.1.1d             |       h1de35cc_2         2.2 MB
527│     pysocks-1.7.1              |           py37_0          30 KB
528│     sqlite-3.30.0              |       ha441bb4_0         2.4 MB
529│     tqdm-4.36.1                |             py_0          50 KB
530│     ------------------------------------------------------------
531│                                            Total:         9.6 MB
532│ 
533│ The following packages will be REMOVED:
534│ 
535│   bzip2-1.0.8-h1de35cc_0
536│   libarchive-3.3.3-h786848e_5
537│   libiconv-1.15-hdd342a3_7
538│   libxml2-2.9.9-hf6e021a_1
539│   lz4-c-1.8.1.2-h1de35cc_0
540│   lzo-2.10-h362108e_2
541│   pip-19.1.1-py37_0
542│   python-libarchive-c-2.8-py37_11
543│   python.app-2-py37_9
544│   setuptools-41.0.1-py37_0
545│   wheel-0.33.4-py37_0
546│   zstd-1.3.7-h5bba6e5_0
547│ 
548│ The following packages will be UPDATED:
549│ 
550│   asn1crypto                                  0.24.0-py37_0 --> 1.0.1-py37_0
551│   ca-certificates                               2019.5.15-0 --> 2019.8.28-0
552│   certifi                                  2019.6.16-py37_0 --> 2019.9.11-py37_0
553│   chardet                                      3.0.4-py37_1 --> 3.0.4-py37_1003
554│   conda                                       4.7.10-py37_0 --> 4.7.12-py37_0
555│   conda-package-han~                          1.3.11-py37_0 --> 1.6.0-py37h1de35cc_0
556│   openssl                                 1.1.1c-h1de35cc_1 --> 1.1.1d-h1de35cc_2
557│   pysocks                                      1.7.0-py37_0 --> 1.7.1-py37_0
558│   sqlite                                  3.29.0-ha441bb4_0 --> 3.30.0-ha441bb4_0
559│   tqdm                                          4.32.1-py_0 --> 4.36.1-py_0
560│ 
561│ 
562│ Preparing transaction: ...working... done
563│ Verifying transaction: ...working... failed
564│ 
565│ RemoveError: 'setuptools' is a dependency of conda and cannot be removed from
566│ conda's operating environment.
567│ 
568│ ┌ Info: Using the Python distribution in the Conda package by default.
569│ └ To use a different Python version, set ENV["PYTHON"]="pythoncommand" and re-run Pkg.build("PyCall").
570│ [ Info: Downloading miniconda installer ...
571│ [ Info: Installing miniconda ...
572│ [ Info: Running `conda config --add channels defaults --file /Users/travis/.julia/conda/3/condarc-julia.yml --force` in root environment
573│ [ Info: Running `conda update -q -y conda` in root environment
574│ ERROR: LoadError: failed process: Process(setenv(`/Users/travis/.julia/conda/3/bin/conda update -q -y conda`,["TRAVIS_OSX_IMAGE=", "DOCUMENTER_KEY=[secure]", "PATH=/Users/travis/.rvm/gems/ruby-2.4.3/bin:/Users/travis/.rvm/gems/ruby-2.4.3@global/bin:/Users/travis/.rvm/rubies/ruby-2.4.3/bin:/Users/travis/.rvm/bin:/Users/travis/bin:/Users/travis/.local/bin:/Users/travis/.nvm/versions/node/v6.14.3/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Users/travis/julia/bin:/Users/travis/julia/bin", "_system_version=10.13", "TRAVIS_BRANCH=master", "TRAVIS_SUDO=true", "TRAVIS_ALLOW_FAILURE=false", "TRAVIS_TMPDIR=/var/folders/nz/vv4_9tw56nv9k3tkvyszvwg80000gn/T/tmp.9bXC8W6x", "TRAVIS_JOB_NUMBER=1532.3", "TRAVIS_PULL_REQUEST_SHA=1a1a07b588fed0a83d67ca07b7f53638f123db1d", "TRAVIS_TIMER_ID=0bdfb127", "TRAVIS_INIT=notset", "TRAVIS_PULL_REQUEST_SLUG=mimiframework/Mimi.jl", "TRAVIS_BUILD_ID=598368563", "TRAVIS_SECURE_ENV_VARS=true", "TRAVIS_BUILD_NUMBER=1532", "NVM_CD_FLAGS=", "ANSI_CLEAR=\\033[0K", "CONTINUOUS_INTEGRATION=true", "TRAVIS_TEST_RESULT=", "TRAVIS_BUILD_STAGE_NAME=Test", "TRAVIS_INTERNAL_RUBY_REGEX=^ruby-(2\\.[0-4]\\.[0-9]|1\\.9\\.3)", "Apple_PubSub_Socket_Render=/private/tmp/com.apple.launchd.80EK6IEYjr/Render", "ANSI_GREEN=\\033[32;1m", "USER=travis", "PS4=+", "rvm_version=1.29.3 (latest)", "TRAVIS_JULIA_VERSION=1.1", "TRAVIS_TIMER_START_TIME=1571177049893001000", "TRAVIS_PULL_REQUEST=579", "JL_PKG=Mimi", "TRAVIS_PULL_REQUEST_BRANCH=fix-param-exports", "TRAVIS_JOB_ID=598368566", "SHELL=/bin/bash", "TRAVIS_TAG=", "TRAVIS_ROOT=/", "RUBY_VERSION=ruby-2.4.3", "TMPDIR=/var/folders/nz/vv4_9tw56nv9k3tkvyszvwg80000gn/T/", "CONDARC=/Users/travis/.julia/conda/3/condarc-julia.yml", "NVM_DIR=/Users/travis/.nvm", "NVM_BIN=/Users/travis/.nvm/versions/node/v6.14.3/bin", "rvm_pretty_print_flag=auto", "DEBIAN_FRONTEND=noninteractive", "TERM=xterm", "HOME=/Users/travis", "PYTHONIOENCODING=UTF-8", "XPC_FLAGS=0x0", "TRAVIS_APP_HOST=build.travis-ci.org", "XPC_SERVICE_NAME=0", "rvm_path=/Users/travis/.rvm", "TRAVIS_OS_NAME=osx", "TRAVIS_ENABLE_INFRA_DETECTION=true", "__CF_USER_TEXT_ENCODING=0x1F5:0x0:0x0", "LC_ALL=en_US.UTF-8", "rvm_prefix=/Users/travis", "GIT_ASKPASS=echo", "_system_type=Darwin", "TRAVIS_ARCH=amd64", "LANG=en_US.UTF-8", "SHLVL=1", "LOGNAME=travis", "TRAVIS_FILTERED=redirect_io", "rvm_bin_path=/Users/travis/.rvm/bin", "TRAVIS_APT_PROXY=http://apt.cache.travis-ci.com", "OLDPWD=/Users/travis/build", "IRBRC=/Users/travis/.rvm/rubies/ruby-2.4.3/.irbrc", "SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.egSRW4kWkC/Listeners", "TRAVIS_REPO_SLUG=mimiframework/Mimi.jl", "GEM_PATH=/Users/travis/.rvm/gems/ruby-2.4.3:/Users/travis/.rvm/gems/ruby-2.4.3@global", "PAGER=cat", "TRAVIS_COMMIT=99139239fa5e03a4e1c5024c669fa3065f4bad15", "TRAVIS_COMMIT_RANGE=ddf5a42cd383de3b5b450c01226e159e33b14010...1a1a07b588fed0a83d67ca07b7f53638f123db1d", "ANSI_RED=\\033[31;1m", "_=/Users/travis/julia/bin/julia", "ANSI_RESET=\\033[0m", "TRAVIS_EVENT_TYPE=pull_request", "PWD=/Users/travis/build/mimiframework/Mimi.jl", "DISPLAY=/private/tmp/com.apple.launchd.APD1NUgEBy/org.macosforge.xquartz:0", "MY_RUBY_HOME=/Users/travis/.rvm/rubies/ruby-2.4.3", "MIMI_RUN_DEPENDENCY_TESTS=TRUE", "TRAVIS_COMMIT_MESSAGE=Merge 1a1a07b588fed0a83d67ca07b7f53638f123db1d into ddf5a42cd383de3b5b450c01226e159e33b14010", "TRAVIS_CMD=julia --check-bounds=yes --color=yes -e \"if VERSION < v\\\"0.7.0-DEV.5183\\\"; Pkg.test(\\\"\${JL_PKG}\\\", coverage=true); else using Pkg; Pkg.test(coverage=true); end\"", "CI=true", "GEM_HOME=/Users/travis/.rvm/gems/ruby-2.4.3", "TRAVIS_BUILD_WEB_URL=https://travis-ci.org/mimiframework/Mimi.jl/builds/598368563", "CONDA_PREFIX=/Users/travis/.julia/conda/3", "TRAVIS_INFRA=macstadium", "TRAVIS_LANGUAGE=julia", "TRAVIS_JOB_WEB_URL=https://travis-ci.org/mimiframework/Mimi.jl/jobs/598368566", "_system_arch=x86_64", "TRAVIS_HOME=/Users/travis", "TRAVIS_BUILD_DIR=/Users/travis/build/mimiframework/Mimi.jl", "BASH_FUNC_shell_session_update%%=() {  :\n}", "JULIA_LOAD_PATH=@:/var/folders/nz/vv4_9tw56nv9k3tkvyszvwg80000gn/T/tmpVVPabJ", "TRAVIS_JOB_NAME=", "TRAVIS=true", "ANSI_YELLOW=\\033[33;1m", "HAS_JOSH_K_SEAL_OF_APPROVAL=true", "_system_name=OSX", "TRAVIS_DIST=notset", "OPENBLAS_MAIN_FREE=1"]), ProcessExited(1)) [1]
575│ Stacktrace:
576│  [1] error(::String, ::Base.Process, ::String, ::Int64, ::String) at ./error.jl:42
577│  [2] pipeline_error at ./process.jl:785 [inlined]
578│  [3] #run#515(::Bool, ::Function, ::Cmd) at ./process.jl:726
579│  [4] run at ./process.jl:724 [inlined]
580│  [5] runconda(::Cmd, ::String) at /Users/travis/.julia/packages/Conda/kLXeC/src/Conda.jl:113
581│  [6] runconda(::Cmd) at /Users/travis/.julia/packages/Conda/kLXeC/src/Conda.jl:111
582│  [7] _install_conda(::String, ::Bool) at /Users/travis/.julia/packages/Conda/kLXeC/src/Conda.jl:172
583│  [8] _install_conda(::String) at /Users/travis/.julia/packages/Conda/kLXeC/src/Conda.jl:152
584│  [9] runconda(::Cmd, ::String) at /Users/travis/.julia/packages/Conda/kLXeC/src/Conda.jl:111
585│  [10] #add#1(::String, ::Function, ::String, ::String) at /Users/travis/.julia/packages/Conda/kLXeC/src/Conda.jl:184
586│  [11] add at /Users/travis/.julia/packages/Conda/kLXeC/src/Conda.jl:183 [inlined] (repeats 2 times)
587│  [12] top-level scope at /Users/travis/.julia/packages/PyCall/ttONZ/deps/build.jl:84
588│  [13] include at ./boot.jl:326 [inlined]
589│  [14] include_relative(::Module, ::String) at ./loading.jl:1038
590│  [15] include(::Module, ::String) at ./sysimg.jl:29
591│  [16] include(::String) at ./client.jl:403
592│  [17] top-level scope at none:0
593│ in expression starting at /Users/travis/.julia/packages/PyCall/ttONZ/deps/build.jl:43
594└ @ Pkg.Operations /Users/julia/buildbot/worker/package_macos64/build/usr/share/julia/stdlib/v1.1/Pkg/src/Operations.jl:1075

lrennels avatar Oct 16 '19 00:10 lrennels

Any solution?

lethanix avatar Oct 27 '20 23:10 lethanix

We've since dropped Julia 1.1 and 1.3 so I'm not sure from my end!

lrennels avatar Oct 27 '20 23:10 lrennels