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Cairo install fail on sierra
@staticfloat Hi, I recently got some error while installing "cairo". I've tried to install it manually by
_
_ _ _(_)_ | A fresh approach to technical computing
(_) | (_) (_) | Documentation: https://docs.julialang.org
_ _ _| |_ __ _ | Type "?help" for help.
| | | | | | |/ _` | |
| | |_| | | | (_| | | Version 0.5.3-pre+5 (2017-05-16 09:15 UTC)
_/ |\__'_|_|_|\__'_| | Commit c3b8ad0ba9* (0 days old release-0.5)
|__/ | x86_64-apple-darwin16.5.0
julia> versioninfo()
Julia Version 0.5.3-pre+5
Commit c3b8ad0ba9* (2017-05-16 09:15 UTC)
Platform Info:
OS: macOS (x86_64-apple-darwin16.5.0)
CPU: Intel(R) Core(TM) i7-4870HQ CPU @ 2.50GHz
WORD_SIZE: 64
BLAS: libgfortblas
LAPACK: liblapack
LIBM: libopenlibm
LLVM: libLLVM-3.7.1 (ORCJIT, haswell)
julia>
using Homebrew; Homebrew.add("cairo");
And I got such errors below. Thanks in advance!
julia> Homebrew.add("cairo");
==> Installing fontconfig from staticfloat/juliatranslated
==> Downloading https://homebrew.bintray.com/bottles/fontconfig-2.12.1_2.sierra.bottle.t
Already downloaded: /Users/bluehope/Library/Caches/Homebrew.jl/fontconfig-2.12.1_2.sierra.bottle.tar.gz
==> Pouring fontconfig-2.12.1_2.sierra.bottle.tar.gz
Error: No such file or directory - /Users/bluehope/.julia/v0.5/Homebrew/deps/usr/etc/fonts/conf.d/10-hinting-slight.conf
Warning: Bottle installation failed: building from source.
==> Downloading https://www.freedesktop.org/software/fontconfig/release/fontconfig-2.12.
Already downloaded: /Users/bluehope/Library/Caches/Homebrew.jl/fontconfig-2.12.1.tar.bz2
==> Downloading https://raw.githubusercontent.com/Homebrew/formula-patches/3790bcd/fontc
Already downloaded: /Users/bluehope/Library/Caches/Homebrew.jl/fontconfig--patch-e7c074109a367bf3966578034b20d11f7e0b4a611785a040aef1fd11359af04d.diff
==> Patching
==> Applying patch-2.12.1-fccache.diff
patching file src/fccache.c
==> ./configure --disable-silent-rules --enable-static --with-add-fonts=/System/Library/
Last 15 lines from /Users/bluehope/Library/Logs/Homebrew/fontconfig/01.configure:
checking for struct statfs.f_flags... yes
checking for struct statfs.f_fstypename... yes
checking for struct dirent.d_type... yes
checking for FREETYPE... no
configure: error: in `/private/tmp/fontconfig-20170517-4279-fjffei/fontconfig-2.12.1':
configure: error: The pkg-config script could not be found or is too old. Make sure it
is in your PATH or set the PKG_CONFIG environment variable to the full
path to pkg-config.
Alternatively, you may set the environment variables FREETYPE_CFLAGS
and FREETYPE_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
To get pkg-config, see <http://pkg-config.freedesktop.org/>.
See `config.log' for more details
If reporting this issue please do so at (not Homebrew/brew or Homebrew/core):
https://github.com/staticfloat/homebrew-juliatranslated/issues
ERROR: failed process: Process(`/Users/bluehope/.julia/v0.5/Homebrew/deps/usr/bin/brew install --ignore-dependencies staticfloat/juliatranslated/fontconfig`, ProcessExited(1)) [1]
in pipeline_error(::Base.Process) at ./process.jl:616
in run(::Cmd) at ./process.jl:592
in #brew#4(::Bool, ::Bool, ::Bool, ::Bool, ::Bool, ::Function, ::Cmd) at /Users/bluehope/.julia/v0.5/Homebrew/src/API.jl:19
in (::Homebrew.#kw##brew)(::Array{Any,1}, ::Homebrew.#brew, ::Cmd) at ./<missing>:0
in #install_and_link#42 at /Users/bluehope/.julia/v0.5/Homebrew/src/API.jl:492 [inlined]
in (::Homebrew.#kw##install_and_link)(::Array{Any,1}, ::Homebrew.#install_and_link, ::String) at ./<missing>:0
in #add#33(::Bool, ::Bool, ::Function, ::String) at /Users/bluehope/.julia/v0.5/Homebrew/src/API.jl:462
in add(::String) at /Users/bluehope/.julia/v0.5/Homebrew/src/API.jl:412
julia>
And this issue is also related with https://github.com/JuliaGraphics/Cairo.jl/issues/165.
I'm not sure why this would happen, can you try installing it again? Do a using Homebrew; Homebrew.cleanup() first.
I've cleared Homebrew like below.
julia> Pkg.rm("Homebrew")
INFO: Removing Homebrew (unregistered)
julia> Pkg.rm("Homebrew")
INFO: Nothing to be done
Add Cairo
julia> Pkg.add("Cairo")
INFO: Installing Cairo v0.3.0
INFO: Installing Homebrew v0.5.6
INFO: Building Homebrew
Updated 2 taps (homebrew/core, homebrew/science).
==> New Formulae
cockroach
==> Updated Formulae
arangodb homebrew/science/lastz miniupnpc tiger-vnc ykpers
ffmpeg homebrew/science/vips rrdtool traildb
homebrew/science/getdp homebrew/science/xmgredit tee-clc weechat
INFO: Building Cairo
WARNING: BinDeps.shlib_ext is deprecated.
likely near /Users/bluehope/.julia/v0.5/Cairo/deps/build.jl:112
INFO: Package database updated
INFO: METADATA is out-of-date — you may not have the latest version of Cairo
INFO: Use `Pkg.update()` to get the latest versions of your packages
(Pkg.update() was finished.) And, I got error like below (_jl_libcairo not defined).
julia> using Cairo
INFO: Precompiling module Cairo.
ERROR: LoadError: UndefVarError: _jl_libcairo not defined
in anonymous at ./<missing>:?
in include_from_node1(::String) at ./loading.jl:488
in include_from_node1(::String) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
in macro expansion; at ./none:2 [inlined]
in anonymous at ./<missing>:?
in eval(::Module, ::Any) at ./boot.jl:234
in eval(::Module, ::Any) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
in process_options(::Base.JLOptions) at ./client.jl:242
in _start() at ./client.jl:321
in _start() at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
while loading /Users/bluehope/.julia/v0.5/Cairo/src/Cairo.jl, in expression starting on line 16
ERROR: Failed to precompile Cairo to /Users/bluehope/.julia/lib/v0.5/Cairo.ji.
in compilecache(::String) at ./loading.jl:593
in require(::Symbol) at ./loading.jl:422
in require(::Symbol) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
You need to run Pkg.build("Cairo"), not Pkg.add("Cairo") again.
-E
On Wed, May 17, 2017 at 1:12 AM, Hongkee Yoon [email protected] wrote:
I've cleared Homebrew like below.
julia> Pkg.rm("Homebrew") INFO: Removing Homebrew (unregistered)
julia> Pkg.rm("Homebrew") INFO: Nothing to be done
Add Cairo
julia> Pkg.add("Cairo") INFO: Installing Cairo v0.3.0 INFO: Installing Homebrew v0.5.6 INFO: Building Homebrew Updated 2 taps (homebrew/core, homebrew/science).==> New Formulae cockroach==> Updated Formulae arangodb homebrew/science/lastz miniupnpc tiger-vnc ykpers ffmpeg homebrew/science/vips rrdtool traildb homebrew/science/getdp homebrew/science/xmgredit tee-clc weechat INFO: Building Cairo WARNING: BinDeps.shlib_ext is deprecated. likely near /Users/bluehope/.julia/v0.5/Cairo/deps/build.jl:112 INFO: Package database updated INFO: METADATA is out-of-date — you may not have the latest version of Cairo INFO: Use
Pkg.update()to get the latest versions of your packages(Pkg.update() was finished.) And, I got error like below (_jl_libcairo not defined).
julia> using Cairo INFO: Precompiling module Cairo. ERROR: LoadError: UndefVarError: _jl_libcairo not defined in anonymous at ./
:? in include_from_node1(::String) at ./loading.jl:488 in include_from_node1(::String) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:? in macro expansion; at ./none:2 [inlined] in anonymous at ./ :? in eval(::Module, ::Any) at ./boot.jl:234 in eval(::Module, ::Any) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:? in process_options(::Base.JLOptions) at ./client.jl:242 in _start() at ./client.jl:321 in _start() at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?while loading /Users/bluehope/.julia/v0.5/Cairo/src/Cairo.jl, in expression starting on line 16 ERROR: Failed to precompile Cairo to /Users/bluehope/.julia/lib/v0.5/Cairo.ji. in compilecache(::String) at ./loading.jl:593 in require(::Symbol) at ./loading.jl:422 in require(::Symbol) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:? — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/JuliaPackaging/Homebrew.jl/issues/189#issuecomment-302018639, or mute the thread https://github.com/notifications/unsubscribe-auth/AAH_aMIcK8lD_JnWQz1inLUntH5_7Nd7ks5r6qwIgaJpZM4NctdF .
Thanks, I've tried
Pkg.build("Cairo");
and then
using Cairo
The result is as below. This gives the same error...
[bluehope:~] % julia
_
_ _ _(_)_ | A fresh approach to technical computing
(_) | (_) (_) | Documentation: https://docs.julialang.org
_ _ _| |_ __ _ | Type "?help" for help.
| | | | | | |/ _` | |
| | |_| | | | (_| | | Version 0.5.3-pre+5 (2017-05-16 09:15 UTC)
_/ |\__'_|_|_|\__'_| | Commit c3b8ad0ba9* (1 day old release-0.5)
|__/ | x86_64-apple-darwin16.5.0
julia> Pkg.build("Cairo")
INFO: Building Homebrew
Updated 2 taps (homebrew/core, homebrew/science).
==> New Formulae
allure audacious bdsup2sub dcos-cli moodbar
==> Updated Formulae
aws-sdk-cpp certbot gist homebrew/science/hypre pre-commit winetricks
awscli coffeescript [email protected] leaps tcpreplay
bluepill firebase-cli homebrew/science/gmsh monax tcptraceroute
INFO: Building Cairo
WARNING: BinDeps.shlib_ext is deprecated.
likely near /Users/bluehope/.julia/v0.5/Cairo/deps/build.jl:112
julia> using Cairo
INFO: Precompiling module Cairo.
ERROR: LoadError: UndefVarError: _jl_libcairo not defined
in anonymous at ./<missing>:?
in include_from_node1(::String) at ./loading.jl:488
in include_from_node1(::String) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
in macro expansion; at ./none:2 [inlined]
in anonymous at ./<missing>:?
in eval(::Module, ::Any) at ./boot.jl:234
in eval(::Module, ::Any) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
in process_options(::Base.JLOptions) at ./client.jl:242
in _start() at ./client.jl:321
in _start() at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
while loading /Users/bluehope/.julia/v0.5/Cairo/src/Cairo.jl, in expression starting on line 16
ERROR: Failed to precompile Cairo to /Users/bluehope/.julia/lib/v0.5/Cairo.ji.
in compilecache(::String) at ./loading.jl:593
in require(::Symbol) at ./loading.jl:422
in require(::Symbol) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
Hmmm, Pkg.build() thinks that libcairo is available. That's weird. Try the following:
using Homebrew
Homebrew.rm("cairo")
Homebrew.add("cairo")
Pkg.build("Cairo")
Hi, I've tried as you suggested (only added using Cairo).
using Homebrew
Homebrew.rm("cairo")
Homebrew.add("cairo")
Pkg.build("Cairo")
using Cairo
I've still got the same error...
_
_ _ _(_)_ | A fresh approach to technical computing
(_) | (_) (_) | Documentation: https://docs.julialang.org
_ _ _| |_ __ _ | Type "?help" for help.
| | | | | | |/ _` | |
| | |_| | | | (_| | | Version 0.5.3-pre+5 (2017-05-16 09:15 UTC)
_/ |\__'_|_|_|\__'_| | Commit c3b8ad0ba9* (1 day old release-0.5)
|__/ | x86_64-apple-darwin16.5.0
julia> using Homebrew
julia> Homebrew.rm("cairo")
julia> Homebrew.add("cairo")
julia> Pkg.build("Cairo")
INFO: Building Homebrew
Updated 1 tap (homebrew/core).
==> Updated Formulae
gofabric8 libphonenumber openshift-cli pyenv tth
kops minizinc prometheus syncthing
INFO: Building Cairo
WARNING: BinDeps.shlib_ext is deprecated.
likely near /Users/bluehope/.julia/v0.5/Cairo/deps/build.jl:112
julia> using Cairo
INFO: Precompiling module Cairo.
ERROR: LoadError: UndefVarError: _jl_libcairo not defined
in anonymous at ./<missing>:?
in include_from_node1(::String) at ./loading.jl:488
in include_from_node1(::String) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
in macro expansion; at ./none:2 [inlined]
in anonymous at ./<missing>:?
in eval(::Module, ::Any) at ./boot.jl:234
in eval(::Module, ::Any) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
in process_options(::Base.JLOptions) at ./client.jl:242
in _start() at ./client.jl:321
in _start() at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
while loading /Users/bluehope/.julia/v0.5/Cairo/src/Cairo.jl, in expression starting on line 16
ERROR: Failed to precompile Cairo to /Users/bluehope/.julia/lib/v0.5/Cairo.ji.
in compilecache(::String) at ./loading.jl:593
in require(::Symbol) at ./loading.jl:422
in require(::Symbol) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
Wait, Homebrew.add("cairo") didn't do anything? try Homebrew.rm("cairo"; force=true, verbose=true) and Homebrew.add("cairo"; verbose=true)
Hi, verbose option gave me more info. Still I get "UndefVarError: _jl_libcairo not defined" message.
julia> using Homebrew
julia> Homebrew.rm("cairo"; force=true, verbose=true)
julia> Homebrew.add("cairo"; verbose=true)
runtime_deps: String["pixman","pcre","libpng","freetype","fontconfig","gettext","libffi","glib"]
translation: beginning for pkg-config
translation: successfully finished for pkg-config
translation: beginning for pixman
translation: replacing dependency pkg-config because it's been translated before
translation: successfully finished for pixman
translation: beginning for libpng
translation: successfully finished for libpng
translation: beginning for freetype
translation: replacing dependency libpng because it's been translated before
translation: successfully finished for freetype
translation: beginning for fontconfig
translation: using staticfloat/juliadeps/fontconfig for the source of our translation
translation: replacing dependency pkg-config because it's been translated before
translation: replacing dependency freetype because it's been translated before
translation: successfully finished for staticfloat/juliadeps/fontconfig
translation: beginning for autoconf
translation: successfully finished for autoconf
translation: beginning for automake
translation: replacing dependency autoconf because it's been translated before
translation: successfully finished for automake
translation: beginning for libffi
translation: replacing dependency autoconf because it's been translated before
translation: replacing dependency automake because it's been translated before
translation: successfully finished for libffi
translation: beginning for pcre
translation: replacing dependency automake because it's been translated before
translation: replacing dependency autoconf because it's been translated before
translation: successfully finished for pcre
translation: beginning for gettext
translation: successfully finished for gettext
translation: beginning for libtool
translation: successfully finished for libtool
translation: beginning for glib
translation: replacing dependency pkg-config because it's been translated before
translation: replacing dependency autoconf because it's been translated before
translation: replacing dependency automake because it's been translated before
translation: replacing dependency libtool because it's been translated before
translation: replacing dependency gettext because it's been translated before
translation: replacing dependency libffi because it's been translated before
translation: replacing dependency pcre because it's been translated before
translation: successfully finished for glib
sorted_deps: AbstractString["staticfloat/juliatranslated/pixman","staticfloat/juliatranslated/libpng","staticfloat/juliatranslated/freetype","staticfloat/juliatranslated/fontconfig","staticfloat/juliatranslated/libffi","staticfloat/juliatranslated/pcre","staticfloat/juliatranslated/gettext","staticfloat/juliatranslated/glib"]
build_deps only: AbstractString["staticfloat/juliatranslated/pkg-config","staticfloat/juliatranslated/autoconf","staticfloat/juliatranslated/automake","staticfloat/juliatranslated/libtool"]
translation: beginning for cairo
translation: replacing dependency automake because it's been translated before
translation: replacing dependency autoconf because it's been translated before
translation: replacing dependency libtool because it's been translated before
translation: replacing dependency pkg-config because it's been translated before
translation: replacing dependency freetype because it's been translated before
translation: replacing dependency fontconfig because it's been translated before
translation: replacing dependency libpng because it's been translated before
translation: replacing dependency pixman because it's been translated before
translation: replacing dependency glib because it's been translated before
translation: successfully finished for cairo
julia> Pkg.build("Cairo")
INFO: Building Homebrew
Updated 2 taps (homebrew/core, homebrew/science).
==> Updated Formulae
minicom
INFO: Building Cairo
WARNING: BinDeps.shlib_ext is deprecated.
likely near /Users/bluehope/.julia/v0.5/Cairo/deps/build.jl:112
julia> using Cairo
INFO: Precompiling module Cairo.
ERROR: LoadError: UndefVarError: _jl_libcairo not defined
in anonymous at ./<missing>:?
in include_from_node1(::String) at ./loading.jl:488
in include_from_node1(::String) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
in macro expansion; at ./none:2 [inlined]
in anonymous at ./<missing>:?
in eval(::Module, ::Any) at ./boot.jl:234
in eval(::Module, ::Any) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
in process_options(::Base.JLOptions) at ./client.jl:242
in _start() at ./client.jl:321
in _start() at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
while loading /Users/bluehope/.julia/v0.5/Cairo/src/Cairo.jl, in expression starting on line 16
ERROR: Failed to precompile Cairo to /Users/bluehope/.julia/lib/v0.5/Cairo.ji.
in compilecache(::String) at ./loading.jl:593
in require(::Symbol) at ./loading.jl:422
in require(::Symbol) at /usr/local/opt.user/julia_0.5/usr/lib/julia/sys.dylib:?
This is very strange, because it is not installing cairo, it gets through the translation routines, but doesn't actually install it.
Please run mv ~/.julia/v0.5/Homebrew/deps/usr mv ~/.julia/v0.5/Homebrew/deps/usr2. This will move your entire Homebrew.jl Homebrew installation to the side, and allow it to start over from scratch. Once you've done that, open up Julia and run Pkg.build(). This will reinstall every Homebrew package you've ever installed, but is a good way to check to see if your Homebrew installation has somehow gotten itself into some inconsistent state.
@staticfloat Hi, Hmm I've also tried to remove everything under ~/.julia/v0.5/Homebrew/ and install everything new. However, this still gave me the same error.
I may try on the clean new user account...
Can you post the output of Pkg.build() after you remove the ~/.julia/v0.5/Homebrew/deps/usr directory?
@staticfloat
I'm also having troubles building Cairo (anything it seems) on OS X 10.11.16/v0.6 on a clean package directory. I Tried to fix things by hand but I always run into new errors, it seems there's something wrong with the overall setup. I also got the PKG_CONFIG error sometimes, but now the error comes from autoreconf (running brew install glib with verbose on):
==> autoreconf -i -f
Failed to execute: autoreconf
See here for the log https://github.com/JuliaGraphics/Cairo.jl/issues/194.
This might be relevant: https://github.com/Homebrew/legacy-homebrew/issues/24468
Note that if I remove the --ignore-dependencies then it works.
