Julia Kukulies

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Committed the publication page now to this PR. Let me know if you have any comments or requests for changes here!

And sorry, I reverted my first two commits because I still had the old index.rst in my branch. Now everything should be clean and the last three commits contain the...

Looks good @freemansw1, I am happy with the changes! And I agree that you it would be easier to include the documentation on segmentation and tracking in a separate PR...

I encounter the same issue when the threshold in `parameters_segmentation` is set below or equal to the maximum threshold used in `parameters_features` (for a feature detection with` target='minimum'`). So I...

Hmm good question @freemansw1! Are you familiar enough with the watershedding and how the mask is created from it to know if anything could lead to the fact that not...

Thanks for sharing your thoughts @freemansw1! That makes definitely sense - I had not thought about these cases before and I could imagine that case 1 applies in my [example...

Just a small update here: I realized that we actually do save the feature area (nr. of grid cells within threshold) in `num` or do I misunderstand this? --> see...

> Yes, agreed on this. I'll think of the best way to do this and can put a page on this example in the PR. I think having a separate...

Yes, I stumbled upon that function during the review of #127, because a new input parameter was added to the functions `segmentation_2D` and `segmentation_3D`: `seed_3D_flag`. Currently the default for `seed_3D_flag`...