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Published 20 hours ago • verified publisher icon JoseBlanca

improve EST mapping to genome

Open JoseBlanca opened this issue 13 years ago • 2 comments

gmap is doing a poor job, improve it. Take a look at tophat and search for others. If none is found a smith-waterman realignment of the gmap result could be an alternative.

JoseBlanca avatar Jun 02 '11 06:06 JoseBlanca

Maybe blat?

JoseBlanca avatar Jun 02 '11 10:06 JoseBlanca

or exonerate server

JoseBlanca avatar Jun 06 '11 10:06 JoseBlanca