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The corresponding code for our paper: A sequence-to-sequence approach for document-level relation extraction.

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Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 3.1.0 to 3.1.1. Release notes Sourced from codecov/codecov-action's releases. 3.1.1 What's Changed Update deprecation warning by @​slifty in codecov/codecov-action#661 Create codeql-analysis.yml by @​mitchell-codecov in codecov/codecov-action#593 build(deps): bump...

dependencies
github_actions

Bumps [abatilo/actions-poetry](https://github.com/abatilo/actions-poetry) from 2.1.5 to 2.1.6. Release notes Sourced from abatilo/actions-poetry's releases. v2.1.6 2.1.6 (2022-08-23) Bug Fixes Updating default poetry version to 1.15 (#49) (0816ab2) Commits 0816ab2 fix: Updating default...

dependencies
github_actions

Bumps [flake8](https://github.com/pycqa/flake8) from 4.0.1 to 5.0.4. Commits 6027577 Release 5.0.4 213e006 Merge pull request #1653 from asottile/lower-bound-importlib-metadata e94ee2b require sufficiently new importlib-metadata 318a86a Merge pull request #1646 from televi/main 7b8b374...

dependencies
python

Try training on BioRED (https://ftp.ncbi.nlm.nih.gov/pub/lu/BioRED/)

Ideally, the [unit test for our model](https://github.com/JohnGiorgi/seq2rel/blob/d91ccaa7df1cc6345ec04f6aaf4e2401de9397e2/tests/models/test_copynet_seq2rel.py#L22) would check that the model can memorize a single training example. This is technically possible by providing the argument `metric_to_check` to [`ensure_model_can_train_save_and_load`](https://docs.allennlp.org/main/api/common/testing/model_test_case/#ensure_model_can_train_save_and_load). However,...

Right now, we have a deserialized output format that looks like: ```python [ { "ADE": [ (("fenoprofen", "DRUG"), ("pure red cell aplasia", "EFFECT")) ] } ] ``` it would be...

enhancement