Jim Thorson

Sorry ... I've been pretty backlogged ... did you ever get this sorted?

Could you try updating to the dev branch of FishStatsUtils and VAST and see if that fixes the issue? I think I found and fixed an error in `amend_output` as...

Sophie, I've found that the `effects` package is pretty unstable and I've been slowly working out how to switch to using `marginaleffects`. Do you wanna help me work through the...

effects package has been annoying, so I added a new option using `marginaleffects package. Do you want to explore that instead? On Tue, Feb 21, 2023 at 12:34 PM Charles-Adams-NOAA...

Could you try out this comparison of `effects` and `marginaleffects`? I tried making it a gory example, with multivariate, different predictors, mapped off stuff, etc, so you might explore a...

I should say too ... it requires VAST >= 3.10.0

But did it successfully make the marginaleffects plots? On Wednesday, February 22, 2023, Charles-Adams-NOAA < ***@***.***> wrote: > Got a warning that the model is likely not converged > >...

Hmm. Annoyingly, it looks like `marginaleffects` has already been updated since last month when this code snippet was working, and I didn't record the packageVersion that I was using before....

I finally found time to track down why `marginaleffects` stopped working ... they changed the syntax for one of their functions in (I think) release 0.10.0. @Charles-Adams-NOAA are you interested...

what packageVersion("VAST") and packageVersion("FishStatsUtils") do you have? On Thu, Mar 9, 2023 at 1:06 PM Charles-Adams-NOAA ***@***.***> wrote: > Getting a different error message now: > > quant = function(x)...