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TypeError trying to run test code from README.md
I'm using the master
branch, and getting the following error when trying to run the basic code from README.md
on my own data:
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<timed exec> in <module>
~\AppData\Local\Continuum\anaconda3\envs\pymc3\lib\site-packages\bartpy\sklearnmodel.py in fit(self, X, y)
131 self with trained parameter values
132 """
--> 133 self.model = self._construct_model(X, y)
134 self.extract = Parallel(n_jobs=self.n_jobs)(self.f_delayed_chains(X, y))
135 self.combined_chains = self._combine_chains(self.extract)
~\AppData\Local\Continuum\anaconda3\envs\pymc3\lib\site-packages\bartpy\sklearnmodel.py in _construct_model(self, X, y)
157 if len(X) == 0 or X.shape[1] == 0:
158 raise ValueError("Empty covariate matrix passed")
--> 159 self.data = self._convert_covariates_to_data(X, y)
160 self.sigma = Sigma(self.sigma_a, self.sigma_b, self.data.normalizing_scale)
161 self.model = Model(self.data, self.sigma, n_trees=self.n_trees, alpha=self.alpha, beta=self.beta)
~\AppData\Local\Continuum\anaconda3\envs\pymc3\lib\site-packages\bartpy\sklearnmodel.py in _convert_covariates_to_data(X, y)
152 X: pd.DataFrame = X
153 X = X.values
--> 154 return Data(deepcopy(X), deepcopy(y), mask=np.zeros_like(X).astype(bool), normalize=True)
155
156 def _construct_model(self, X: np.ndarray, y: np.ndarray) -> Model:
TypeError: __init__() got an unexpected keyword argument 'mask'
Removing mask=np.zeros_like(X).astype(bool)
from line 154 of sklearnmodel.py
eliminates the error.