PiRATE

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Usage without VM

1

We have a managed galaxy service which is connected to our HPC system. Some users showed interest in using the PiRATE pipeline. As a workaround we started the VM but...

timeu

MGEScan-nonLTR error

10

Hi Jeremy-- Many thanks for helping me out with the uploading of files to the Virtual Box. I've managed to figure that out. I was doing a preliminary run for...

jphruska

long read sequence data

1

I was wondering if it would be possible now or in the future version to run this pipeline using long-read sequence data such as Nanopore or PacBio

pwkooij

I am experiencing extremely slow download speeds when trying to download the PiRATE-VM file from the following URL: https://www.seanoe.org/data/00406/51795/data/53095.ova. The download process is taking significantly longer than expected, and it...

yweii