Iván_bh

Thank you very much for your answer, I changed the configf.txt file. configf.txt that I've used. [configf.txt](https://github.com/rvolden/C3POa/files/2958070/configf.txt) > #configf poa/home/ivan/C3POa/bio-pipeline/poaV2/poa racon/home/ivan/C3POa/racon/bin/racon water/home/ivan/C3POa/EMBOSS-6.6.0/emboss/water minimap2/home/ivan/C3POa/minimap2/minimap2 consensus/home/ivan/C3POa/consensus.py racon/home/ivan/C3POa/racon/bin/racon blat/home/ivan/blatSrc The same result: ~/C3POa$...

Thank you very much for the file. I checked the file and worked, but I think that I have problems with the blat installation. ~/C3POa$ python C3POa_preprocessing.py -i BC26.fastq -o...