cellassign icon indicating copy to clipboard operation
cellassign copied to clipboard

Published 20 hours ago • verified publisher icon Irrationone

Use sizeFactors from SingleCellExperiment

Open kieranrcampbell opened this issue 6 years ago • 3 comments

If s is NULL we can check sizeFactors(sce) before computing them ourselves, but should have warning as often people don't know what sits there

kieranrcampbell avatar Jan 14 '19 15:01 kieranrcampbell

Does this package support SingleCellExperiment objects currently?

robertamezquita avatar Jan 16 '19 23:01 robertamezquita

Hi @robertamezquita

Yes SingleCellExperiments are supported as the main input. Please see the vignette or simply look at the input format section in ?cellassign

Kieran

kieranrcampbell avatar Jan 16 '19 23:01 kieranrcampbell

Great! I just didn't see it in the README. Thanks!

robertamezquita avatar Jan 16 '19 23:01 robertamezquita