ITKElastix
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InsightSoftwareConsortium
An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images
Aims to avoid confusion between the elastix project and the ITKElastix project. No longer `include(ITKModuleExternal)`
The `itk.ElastixRegistrationMethod` method has the `SetNumberOfThreads` and `GetNumberOfThreads` functions to set and get the number of threads respectively. However, `itk.TransformixFilter` does not have such functions. Should the number of threads...
I was trying to execute the example in `ITK_Example05_PointRegistration.ipynb` with the same data. Despite this, my code has been running for a really long time (>3 hours). After generating a...
Update the CI for notebook tests to use Netlify and Nbmake. A NETLIFY_TOKEN and a NETLIFY_SITE_API_ID still have to be added to the secrets of the ITKElastix repo. I suppose...
I am trying to use the GradientDifference and NormalizedGradientCorrelation metrics but could not quite figure out how to prepare the input. I am following the ITK_Example07_MultimetricMultiImageRegistration example and use a...
Hello, We are trying to register 2 3D images with ITK-Elastix with the following code ```py # Load images in itk workspace fixed_image = itk.imread('0N_ROI.tif') moving_image = itk.imread('1450N_ROI.tif') # Cast...
```py import itk parameter_object = itk.ParameterObject.New() ``` produces: ```text Traceback (most recent call last): File "C:\Dev\ITK-py\Wrapping\Generators\Python\itk\support\lazy.py", line 137, in __getattribute__ base.itk_load_swig_module(module, namespace) File "C:\Dev\ITK-py\Wrapping\Generators\Python\itk\support\base.py", line 110, in itk_load_swig_module l_module =...
Dear Developers: I am a Ph.D. candidate from Fudan University, China. Thanks for your kind providing us with the good package: ITK-Elastix, which is very helpful for medical registration. However,...
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An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images