Medical-SAM2

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@jiayuanz3 @WuJunde Dear Authors, Thank you for your inspiring work! Could you share more details about the BraTS 2021 training and evaluation in Table 2? For instance, did you split...

qinliuliuqin

How to preprocess one's own dataset in 3D medical image segmentation? Can I train directly with the training code after preprocessing?

Zhongrocky

Hello. Thank you for the great model and code. I am looking for a way to segment a 3d image non interactively. What I want to do is segmentation without...

pomota

convert onnx

2

After training with my own dataset, can I export the saved weights to ONNX? How to convert?

lucky-asia

RuntimeError: Could not infer dtype of numpy.int64

1

Hello, thanks for great work! I am trying to running the code with 3D data you provided, but I got this error. I set up Ubuntu Docker: Operating System: Ubuntu...

sahikabetul

关于mask prompt的在3D数据集上/视频序列的训练方法Training Methods for Mask Prompting on 3D Datasets / Video Sequences

1

我注意到在您的代码中也存在着 I noticed that your code also contains  在训练3d数据集的相关代码，可是当我使用这个函数来尝试利用第一帧的mask作为prompt来进行训练的时候，发现出现第一帧没有梯度的报错，我通过debug发现是在代码中，对于有mask prompt的帧直接输出输入mask导致的， In the code related to training on 3D datasets, when I tried to use the mask from the first...

sove45

inference and geneal Dataset class are needed.

1

Hey, I am trying to do some inference with your code. I think it will be better if you can: 1. Add a Dataset class for a general use case,...

MelindaDong

Dear author Could you please provide guidance on the correct implementation approach for BraTS2021, or share the specific code/configuration used in your experiments? This would greatly help the research community...

ObliviateHe

Dear author I could not find the code of self-sorting memory bank you claimed in the paper. Based on your paper, MedSam2 shouldn't needed to train right? Why there are...

will0331

xidong66