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Bootstrap an OBO Library ontology

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1. A component `make` target MUST NOT, directly or indirectly, depend on _any_ ODK generated files/make targets, in particular not: imports, seeds, merged source files and other components. 2. In...

documentation

This is, IMO, a major missing component of the ODK * MVP - generate a report of mappings for obsoleted terms every time imports are updated. We already have suitable...

enhancement
tech

Context: https://github.com/obophenotype/uberon/pull/2379#discussion_r845999223 To ensure users enter **date property** values using 'dcterms:date', will you please incorporate a quality control step that confirms these are entered as 'dcterms:date' and not a URL?...

https://allcontributors.org/ _This is a specification for recognizing contributors to an open-source project in a way that rewards every contribution, not just code._ _The basic idea is this:_ _Use the project...

needs-volunteer

- oaklib - sssom-py - rdftab - robot (ok no need to check) - dosdp - dosdp-tools

documentation

Right now if we set is_large: TRUE and the module type is defined the `is_large` is ignred.

While most of the standard, ODK-generated workflows use ROBOT, there are still rules where OWLTOOLS is used: ```Makefile $(SUBSETDIR)/%.owl: $(ONT).owl | $(SUBSETDIR) $(OWLTOOLS) $< --extract-ontology-subset --fill-gaps --subset $* -o [email protected]...

enhancement

Currently (if I'm not wrong) it just tells you what is obsolete, ideally it should also tell you what to replace it by @dosumis just pinging you Will bring up...

tech

Currently the automated diff uses cl-edit to built files - while this is correct, it would be useful to have one that can be manually triggered for releases that compares...