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ScoreFlow MMGBSA in parallel on local computer.

Open diegoenry opened this issue 5 years ago • 0 comments

MMGBSA needs "ante-MMPBSA.py" to generate the input files, It takes some time because it's a python script, and could be easly done in parallel.

In addition, post-processing MD simulations of a SINGLE system, one may benefit from MMGBSA.py.MPI

The solution could be the same as always: echo all commands, including "cd ${RUNDIR}/${LIGAND}" into a "mmpbsa.xargs" file then running them all according to the number of available CPUs.

diegoenry avatar Jul 13 '18 15:07 diegoenry