pyPESTO
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Calculation of credibility intervalls currently not via joint posterior
Hi there,
i recently figured out that the credibility intervals in pyPESTO are not calculated based on the x-percent HDI of the joint posterior but via percentiles for each parameter separately.
This is for example in the function calculate_ci_mcmc_sample
the case.
Wouldn´t it be better to calculate a posterior threshold based on an x-percent HDI on the joint posterior and afterward restrict the individual parameter CIs to the overall posterior threshold value? I think the other method could be problematic as individual calculation on each parameter does not necessarly have to match with the calculation on the joint posterior.
Best,
Sebastian