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Published 20 hours ago • verified publisher icon HumanSignal

Labeling medical images using nifti format

Open Californium23 opened this issue 4 years ago • 7 comments

How can I import DICOM images for segmentation or other labeling task ? Converting to png may not be a good choice as the transforming threshold needs to be adjusted at any time.

Californium23 avatar Dec 07 '20 09:12 Californium23

Unfortunately LS doesn't support DICOM yet. But we have DICOM support in our roadmap.

makseq avatar Dec 07 '20 23:12 makseq

Could you add nifti to do list as well then for neuroimaging?

jrdalenberg avatar Dec 09 '20 14:12 jrdalenberg

Could you explain please what is nifti?

makseq avatar Dec 09 '20 19:12 makseq

Hi there, just noticed this github repo, and like it much!

I would warmly recommend using cornerstone for the DICOM integration and the cornerstone tools for the GUI!

sandorkonya avatar Feb 21 '21 14:02 sandorkonya

Hi, is anyone currently working on this? I would like to give it a shot.

fcossio avatar Oct 01 '21 00:10 fcossio

@fcossio Hi, nobody works on it. If you could make a PR, it would be amazing :slightly_smiling_face:

makseq avatar Oct 01 '21 01:10 makseq

Any news? My temporal solution is to convert all the layers to video frames.

doantientai avatar Apr 30 '24 14:04 doantientai