SnapHiC
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HuMingLab
SnapHiC: Single Nucleus Analysis Pipeline for Hi-C Data
Hi, We are trying to apply your RWR imputation method on single cell hic data with 10kb resolution. I see the rwr output included each .bedpe file for each chromosome...
The test dataset link for download on renlab is not available. http://renlab.sdsc.edu/abnousa/snapHiC/test/input/Ecker/ODC_100.tar.gz Could you please update the correct link?
Hi, I am encounting this error when running snapHiC with a single cell hic contact dataset. I use Python=3.6.1 with the exact dependencies in the requirements. Here is a bug,...
Bumps [scipy](https://github.com/scipy/scipy) from 1.5.0 to 1.10.0. Release notes Sourced from scipy's releases. SciPy 1.10.0 Release Notes SciPy 1.10.0 is the culmination of 6 months of hard work. It contains many...
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The URL for the Local genomic features in the step 3 of section 2(https://github.com/HuMingLab/SnapHiC#2-required-input-files) of the main documentation is not working. Following is the URL listed in there. http://enhancer.sdsc.edu/yunjiang/resources/genomic_features/ Could...
Bumps [numpy](https://github.com/numpy/numpy) from 1.19.1 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...