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Installing OmegaFold in Ubuntu v22.04

Open biotech70 opened this issue 3 years ago • 3 comments

Hi, What is the best version of Python and GCC version to install OmegaFold?

biotech70 avatar Sep 01 '22 20:09 biotech70

I am using an Anaconda environment in Ubuntu 22.04 for OmegaFold. Anaconda should provide you most of the dependencies and your GCC version should not be an issue

debadutta-patra avatar Sep 06 '22 06:09 debadutta-patra

What is the best workflow for installing OmegaFold using the Anaconda environment?

biotech70 avatar Sep 06 '22 18:09 biotech70

You can install Anaconda via the installation script from their website. After that, make sure that the conda environment is active, which should be evident from the word "base" in your command prompt. If your conda environment is not active use: conda activate Now you can follow the instructions in the README.md file to install Omegafold, in short use the following commands. pip install git+https://github.com/HeliXonProtein/OmegaFold.git wget https://helixon.s3.amazonaws.com/release1.pt mv release1.pt ~/.cache/omegafold_ckpt/model.pt

debadutta-patra avatar Sep 08 '22 06:09 debadutta-patra