CellScopes.jl icon indicating copy to clipboard operation
CellScopes.jl copied to clipboard

Published 20 hours ago • verified publisher icon HaojiaWu

Inquiry about Data Conversion in CellScopes

Open YuxiZhang-0113 opened this issue 7 months ago • 2 comments

Dear CellScopes team, Hello! I have always admired your team's outstanding publications in kidney research. Recently, I tested CellScopes, and I must say it is truly impressive. I was amazed by its ability to import the original Tiff files of Visium data and its seamless handling of various spatial transcriptomics data. I have two questions:

  1. Can a CartanaObject be converted into a Seurat or Scanpy object?
  2. Can the objects obtained using the cs.add_visium_img function be exported as Seurat or Scanpy objects?

YuxiZhang-0113 avatar Jul 04 '24 18:07 YuxiZhang-0113