New clone fails due to lack of graphnn permission

[Divide-By-0]

When I run the first command, [..]> git clone --recursive https://github.com/Hanjun-Dai/graph_comb_opt I get this error, which seems to be related to outdated ssh keys online?

Cloning into 'graph_comb_opt'...
remote: Enumerating objects: 6, done.
remote: Counting objects: 100% (6/6), done.
remote: Compressing objects: 100% (5/5), done.
remote: Total 271 (delta 1), reused 3 (delta 1), pack-reused 265
Receiving objects: 100% (271/271), 2.28 MiB | 2.52 MiB/s, done.
Resolving deltas: 100% (134/134), done.
Submodule 'graphnn' ([email protected]:Hanjun-Dai/graphnn) registered for path 'graphnn'
Cloning into '[..]/graph_comb_opt/graphnn'...
[email protected]: Permission denied (publickey).
fatal: Could not read from remote repository.

Please make sure you have the correct access rights
and the repository exists.
fatal: clone of '[email protected]:Hanjun-Dai/graphnn' into submodule path '[..]/graph_comb_opt/graphnn' failed
Failed to clone 'graphnn'. Retry scheduled
Cloning into '[..]/graph_comb_opt/graphnn'...
[email protected]: Permission denied (publickey).
fatal: Could not read from remote repository.

Please make sure you have the correct access rights
and the repository exists.
fatal: clone of '[email protected]:Hanjun-Dai/graphnn' into submodule path '[..]/graph_comb_opt/graphnn' failed
Failed to clone 'graphnn' a second time, aborting

[Hanjun-Dai]

I checked on my side and it works well.

Probably that is relevant to your own key?

You can also clone the two repositories separately, without using recursive clone.

[Divide-By-0]

Sure, so if I just drag the other repo into this graphnn and clone non recursively, it should be the same right?

[Hanjun-Dai]

It should be. But probably you want to make sure the version of graphnn matches (graphnn @ bdf51e6)

[Divide-By-0]

Sure, the only change since then is cuda being restricted to 8.0. Now I get the error when running make -j on realworld tsp2d: make: *** No rule to make target ../../../graphnn/build/lib/libgnn.a', needed by build/dll/libtsp2d.so'. Stop.

[Hanjun-Dai]

did you

1. place graphnn in the right folder?
2. get graphnn built successfully first?

[Divide-By-0]

So I'm trying to build graphnn and theres this error since I don't have a GPU. I'll switch to a machine with one then keep you updated.

In file included from include/tensor/cpu_dense_tensor.h:5:0, from include/tensor/tensor_all.h:5, from include/nn/variable.h:7, from include/nn/factor.h:4, from include/nn/cross_entropy.h:5, from src/nn/cross_entropy.cpp:1: include/tensor/t_data.h:6:34: fatal error: thrust/device_vector.h: No such file or directory #include <thrust/device_vector.h> ^

[daltunay]

Hi, I have the same error. I successfully built graphnn, and placed it manually (due to no permission error) in the graph_comb_opt folder. When I run make -j, I get the error : make: *** No rule to make target '../../../graphnn/build/lib/libgnn.a', needed by 'build/dll/libmvc.so'. Stop.

I don't know if that's important, but /graphnn/build only contains an objs folder, and no dll one. At least I can't see it. Though, I was able to run the test on MNIST with graphnn.

Any ideas ?