Guillaume Gaullier

I guess this could simplify the user interface a bit, but the default value (when the new command-line option you are suggesting is not set) should be considered carefully. Should...

I agree: it would also be convenient as a user if the final epoch number matched the total number of epochs requested in the job (this kind of offset absolutely...

I am also not sure if this would interfere with anything in cryoDRGN, but the behavior you describe with star file entries automatically "lined up" based on particle image name...

Looks like you are in luck, because `starfile` already handles optics groups tables. See https://github.com/zhonge/cryodrgn/pull/70#issuecomment-976457691 and @alisterburt's comment https://github.com/zhonge/cryodrgn/pull/70#issuecomment-976466553. By the way, Alister is the one qualified to help you...

I have used `backproject_voxel` without error, but I never tried it with the `--ind` option. Do you also get an error without this option?

It is definitely most useful to write all columns from the input star file to the output star file. This is how one can subsequently run refinements in RELION without...

> I am not sure exactly how to use translators more From my very limited experience hacking on Zotero [1], at least any "QuickCopy" functionality one would want can be...

No need to wait for an update, you can still use pyCORN now. It installs and works fine in a conda environment when following the instructions from this repository (at...

I agree it would be easier if the user doesn't have to know (or remember) the wavelength in advance. Also, it should handle corner cases like the user asking for...

Sorry, I didn't make this clear in the first message, but I wrote this from the point of view of a user, not a developer. I have no clue how...