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verified publisher icon GregorySchwartz
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An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.

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Error in system2("too-many-cells", args = c(args, autoArgs), stdout = TRUE) : error in running command

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hi, thanks for your execellent job! when i run your tutuial: res=TooManyCellsR::tooManyCells(mat = pbmc@assays$RNA@counts, args = c( "make-tree" , "--no-filter" , "--normalization", "NoneNorm" , "--draw-max-node-size", "40" , "--draw-max-leaf-node-size", "70" )...

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verified publisher icon GregorySchwartz

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An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.

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