ArchR
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Error in h5read(x, paste0(useMatrix, "/Info/Units")): Object 'PeakMatrix/Info/Units' does not exist in this HDF5 file.
I used my own peakset, but failed, plz help me, I beg u.
proj2 <- ArchRProject( ArrowFiles = ArrowFiles, outputDirectory = "PBMC_tile", copyArrows = TRUE )
proj2 <- filterDoublets(ArchRProj = proj2)
proj2 <- addPeakSet( ArchRProj = proj2, peakSet = gr )
proj2 <- addIterativeLSI(ArchRProj = proj2, useMatrix = "PeakMatrix", name = "IterativeLSI")
the error: Error in h5read(x, paste0(useMatrix, "/Info/Units")): Object 'PeakMatrix/Info/Units' does not exist in this HDF5 file. Traceback:
- addIterativeLSI(ArchRProj = proj2, useMatrix = "PeakMatrix", . name = "IterativeLSI")
- unique(unlist(lapply(ArrowFiles, function(x) h5read(x, paste0(useMatrix, . "/Info/Units")))))
- unlist(lapply(ArrowFiles, function(x) h5read(x, paste0(useMatrix, . "/Info/Units"))))
- lapply(ArrowFiles, function(x) h5read(x, paste0(useMatrix, "/Info/Units")))
- FUN(X[[i]], ...)
- h5read(x, paste0(useMatrix, "/Info/Units"))
- stop("Object '", name, "' does not exist in this HDF5 file.")
there is no meaningful information in the log