Regulate minimum coverage manually ？

[Peng-Lingwei]

Hello！ Thanks for such an excellent software, I have some doubts about diffmod.table. When I checked the Colum9 and Column10 of diffmod.table, I found that the minimum coverage is 15. I am not sure whether I can select the minimum coverage manually (I am trying to get a lower coverage), because I did not find the relative parameter.

[yuukiiwa]

Hi @Peng-Lingwei,

You will have to add the following to your config.yml file:

criteria:
    readcount_min: <integer less than 15>

You can find more information about the config.yml file from here: https://xpore.readthedocs.io/en/latest/configuration.html

Thanks!

Best wishes, Yuk Kei