probability_modified and mod_ratio are 0

[lbwfff]

Dear Developer

I was recently trying to analyze one of the HEK293T datasets using m6anet and I have some questions about the results. Some of the sites in the results file have 0 for both probability_modified and mod_ratio as shown in the figure below for example , how should I interpret these sites.

Also, the maximum probability_modified in my results is only 0.35 and mod_ratio is 0.15 (data ERR4706156), which doesn't seem to be the expected result. Do you have any suggestions as to what is causing the low probability_modified and mod_ratio?

Thanks,

LeeLee