m6anet
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GoekeLab
Detection of m6A from direct RNA-Seq data
Hello, I think I reached out via email but wanted to post this publicly as well. I am currently facing an issue with my m6anet data analysis. I have two...
I am trying to obtain m6a modifications from direct RNA sequencing of the avian influenza virus. It seems I have been able to obtain the eventalign.txt file... but after running...
Dear all, sorry for continuously bothering you, but I would really need to work with m6anet. Maybe most/all of my problems have to do with me working in a Windows...
Hi, I tried to run this tool for some DRS Nanopore reads. However, the last command (m6anet inference) didn't execute and throws the following error:  If you can, please...
First of all I would like to thank the authors for their noble work in the field of RNA modifications. I am trying to understand the results obtained from 'inference'...
Hi, I've been trying out m6anet on our RNA004 reads and I have a question about alignment. As a default, we tend to align our reads to the genome for...
Dear all, wouldn't have expected this causing so much trouble. Now I have used the test-file from m6anet/tests/data and the ran: m6anet inference --input_dir d:\temp\output --out_dir d:\temp\output --n_processes 4 --num_iterations...
Dear all, now I get another error when running m6anet dataprep: File "pandas\_libs\lib.pyx", line 2280, in pandas._libs.lib.maybe_convert_numeric ValueError: Unable to parse string "NNNNN" During handling of the above exception, another...
Dear all, after having struggled with m6Anet on Galaxy, where is has been running for days now, I resorted to give it a try on a windows system. Now when...
Dear m6anet-team, I have a question regarding m6anet, which I try to use in Galaxy to reproduce some RNA-sequencing study in order to get familiar with this topic. In your...