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replace assignGeneIDexonMatch with assignGeneIDs

Open jonathangoeke opened this issue 2 years ago • 1 comments

  • use a single function for this task (assignGeneIDs ranks by similarity)
  • make consistent how transcripts are assigned that match genes through intermediate novel transcripts: assign read class to genes iteratively, require that the strand matches that of the gene

jonathangoeke avatar Mar 25 '22 03:03 jonathangoeke

implemented in #260

jonathangoeke avatar Apr 21 '22 06:04 jonathangoeke