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LISA cluster labels in the tutorial vignette

Open jponmattam opened this issue 1 year ago • 1 comments

https://github.com/GeoDaCenter/rgeoda/blob/master/vignettes/rgeoda_tutorial.Rmd

I think lines 284 and 285 should be switched in the Vignette. When you run lisa_labels(lisa) in line 291-292, the order is "Low-High", "High-Low" <-- since everything else is the same order as lines 291 - 287, the 3 and 4 category labels seem like they should be switched - ie. 3 = "Low-High" and 4 = "High-Low"

jponmattam avatar Mar 31 '23 19:03 jponmattam

@lixun910, I would be curious about this as well as the comment seems correct. On the tutorial page online it states that high-low is 3 and low-high is 4. Yet when printing the labels, 3 is low-high and 4 is high-low (4th and 5th elements, respectively).

Screenshot 2023-06-07 at 13 50 24

When I also produce it on my end, 3 would be low-high while 4 would high-low:

Screenshot 2023-06-07 at 13 50 53

I had assumed that this was corrected from #18, but maybe we are mistaken. As can see, using 0.0.10-2 is producing those labels.

sessionInfo()
R version 4.2.0 (2022-04-22)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS 13.4

Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] tidyr_1.3.0         terra_1.7-31        sf_1.0-13           rnaturalearth_0.3.3 rmapshaper_0.5.0    rgeos_0.6-3        
 [7] rgeoda_0.0.10-2     digest_0.6.31       rgdal_1.6-7         plyr_1.8.8          pdftools_3.3.3      ncf_1.3-2          
[13] janitor_2.2.0       ggplot2_3.4.2       fs_1.6.2            fasterize_1.0.4     elsa_1.1-28         raster_3.6-20      
[19] sp_1.6-1            dplyr_1.1.2         pacman_0.5.1       

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.10        lubridate_1.9.2    lattice_0.21-8     class_7.3-22       utf8_1.2.3         V8_4.3.0          
 [7] R6_2.5.1           e1071_1.7-13       httr_1.4.6         pillar_1.9.0       rlang_1.1.1        curl_5.0.0        
[13] rstudioapi_0.14    qpdf_1.3.2         stringr_1.5.0      munsell_0.5.0      proxy_0.4-27       compiler_4.2.0    
[19] pkgconfig_2.0.3    askpass_1.1        tidyselect_1.2.0   tibble_3.2.1       codetools_0.2-19   fansi_1.0.4       
[25] withr_2.5.0        grid_4.2.0         jsonlite_1.8.4     gtable_0.3.3       lifecycle_1.0.3    DBI_1.1.3         
[31] magrittr_2.0.3     units_0.8-2        scales_1.2.1       KernSmooth_2.23-20 cli_3.6.1          stringi_1.7.12    
[37] snakecase_0.11.0   generics_0.1.3     vctrs_0.6.2        tools_4.2.0        glue_1.6.2         purrr_1.0.1       
[43] pkgload_1.3.2      timechange_0.2.0   colorspace_2.1-0   classInt_0.4-9 

bpfree avatar Jun 07 '23 18:06 bpfree