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host of the symbiont taxid [MIXS:0001306]- for Symbiont-associated (SA) package

Open only1chunts opened this issue 4 years ago • 4 comments

New term details

Term name - host of the symbiont taxid
Structured comment name -symb_host_taxid
Definition - NCBI taxon id of the host of the symbiotic organism.
Expected value - NCBI taxon identifier of the host of the symbiotic organism
Value syntax - {integer}
Example - 145637
Packages(s) - symbiont-assiociated

Additional context Term created as part of Symbiont associated package.

only1chunts avatar Jun 28 '21 13:06 only1chunts

same question for this as for other taxonomy fields, do we want to restrict it to NCBI only? see #128 , which is flagged for discussion for v7 release. I suggest for now we leave this term as it is and review in v7 along with other taxonomy ID terms.

only1chunts avatar Jun 28 '21 13:06 only1chunts

more than OK. we do not want to restrict to NCBI :-)

ndheilly avatar Jun 28 '21 14:06 ndheilly

Update as per agreed-upon pattern.

Term name - host of the symbiotic host taxon id
Term ID - MIXS:0001306
Structured comment name -host_of_host_taxid
Definition - NCBI taxon id of the host of the symbiotic host organism.
Expected value - NCBI taxon identifier of the host of the symbiotic taxon organism
Value syntax - {integer}
Example - 145637
Packages(s) - symbiont-assiociated

spreadsheet updated

Leaving open until issue of NCBI only IDs is resolved.

ramonawalls avatar Jul 03 '21 05:07 ramonawalls

Confirmed in MIxS v6 Term Updates sheet and included as New Term in v6 update log Also added labels for discussion in v7.

only1chunts avatar Jul 07 '21 15:07 only1chunts