Microbial Genomics Lab

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icon company CIAD, A.C. icon location Mazatlán, México icon location The Microbial Genomics Lab does sequencing and bioinformatic analyses of microbes from aquatic environments. We do some coding mainly in bash.

Results 3 comments of Microbial Genomics Lab

Is it possible to visualize a Qiime 1.9 OTU biom file

Hi, I have created a little script to get all krona charts from an OTU table, check it here https://github.com/GenomicaMicrob/OTUsamples2krona Browse to the end of the README file, there is...

ktImportText- multiple samples-one text file

Hi guys, I often run into the same problem and therefore have made a little script in bash: https://github.com/GenomicaMicrob/OTUsamples2krona The crucial part is the OTUs table file, but there are...

Incompatible packages when installing through conda/mamba

Similar problem here when trying to install with MAMBA v1.1.0: Could not solve for environment specs Encountered problems while solving: - package checkm2-1.0.1-pyh7cba7a3_0 requires tensorflow >=2.1.0,